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The map label for this gene is yfbE [C]

Identifier: 32265696

GI number: 32265696

Start: 189306

End: 190484

Strand: Direct

Name: yfbE [C]

Synonym: HH0197

Alternate gene names: 32265696

Gene position: 189306-190484 (Clockwise)

Preceding gene: 32265695

Following gene: 32265697

Centisome position: 10.52

GC content: 36.13

Gene sequence:

>1179_bases
ATGATACCTTATAGCACACAATATATTGAGCAAGATGACATTGAGGCTGTAAATTTCGCCTTAGAATCTTCTCACCTTAC
TCAAGGTGCTCTTACACAAGAATTTGAAGCCACTCTTGCTTCAAAAATAGGTGTTCAATATGCTATAAGCTTTAATTCTG
CCACTTCTGCCTTATTCGCACTTTATGGTGCGTTTATGTATAAATACTTTCCACATCTTGCGCATTTTTATAATACTTTA
GATTCTAAAATATCAAAGCAAGATAAAGAGGAAATTTATTTTATCACTACGCCTATTAGCTTTGTCGCCACAACAAATAT
GATGCTTCAATGGGGAATTACGCCTCTATTTTGCGATGTTAAAGATGATGGAAATATTGATGAAAAGGCACTTGAGCACA
TTCTCTCTACTCACCCTAAGAGAGCACATATTAAGGCGATTGTGAGCGTAGATTATGGCGGGAAAAGCGTAGAAATATCA
TCTCTACGCTCACTTGCACAAAAACACAATCTTTTACTTTTTTCAGATAGTTCTCATTCATTTGGTGGAAGCTATAATGG
ACAAGCTATAGGCTCACTTGCTGATGCAACTATTTTTAGCTTTCACGCACTCAAATCCATTACTACTGCGGAAGGCGGAG
CATTACTCACTAATGATGAAGAATTGGCACACTATGCGCGTCTTTTACTCTCTCACGGAGTAGAAAAAAAATCTTTGTGG
AATTATGATTGTCTTCTTGGAGGTATGAATTTTCGCCTTAGTGAAGTAGGTGCAGCACTTGGTCTTAGCCAACTTAAAAA
ACTTGATACCTTTATCACTCATCGCCATAATATCGCAACACTCTATGATGAAGCATTTAAAAATAATGCTAATTTTGGCA
TTATTGCTATACCTTCACATATTCGTAGCTCTCATCATCTCTATCCTATTTTGCTTTATCCACATTTATGGTGTCAAAAG
GAGCATATTTTTCAACAATTACAAGCACAAGATTTAGGCGTGCAAGTGCATTACAAACCTATTTATCAGTTTAGCCTTTA
CAAAAGGCTTTTTGGCGACATATCCCTACCAAATGCAGATAGATTCTATCTCTCTGAAATATCTATCCCCTGTCATCAAA
GTCTTAGCACTCAACAAGCTCAAAATATTATAGAAATAATTACCAAAACCTGCAAATAA

Upstream 100 bases:

>100_bases
TTGAAAAAATTTGGCTCACTTTTCCGTGTCTCTCACGATACTGATAAGCTAAGTAATCAACGCGTTCAAGAGCTTTTAAC
TTAAAAGATTCTCAAATATA

Downstream 100 bases:

>100_bases
TACTATGGCAACAAAAAGTTAGGCTAATTTTACCTAGCTTTAAATAGAGTAAGCTACAATAGCTTTTTTACACTATGGAG
TTAGCTATGGATAAAACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MIPYSTQYIEQDDIEAVNFALESSHLTQGALTQEFEATLASKIGVQYAISFNSATSALFALYGAFMYKYFPHLAHFYNTL
DSKISKQDKEEIYFITTPISFVATTNMMLQWGITPLFCDVKDDGNIDEKALEHILSTHPKRAHIKAIVSVDYGGKSVEIS
SLRSLAQKHNLLLFSDSSHSFGGSYNGQAIGSLADATIFSFHALKSITTAEGGALLTNDEELAHYARLLLSHGVEKKSLW
NYDCLLGGMNFRLSEVGAALGLSQLKKLDTFITHRHNIATLYDEAFKNNANFGIIAIPSHIRSSHHLYPILLYPHLWCQK
EHIFQQLQAQDLGVQVHYKPIYQFSLYKRLFGDISLPNADRFYLSEISIPCHQSLSTQQAQNIIEIITKTCK

Sequences:

>Translated_392_residues
MIPYSTQYIEQDDIEAVNFALESSHLTQGALTQEFEATLASKIGVQYAISFNSATSALFALYGAFMYKYFPHLAHFYNTL
DSKISKQDKEEIYFITTPISFVATTNMMLQWGITPLFCDVKDDGNIDEKALEHILSTHPKRAHIKAIVSVDYGGKSVEIS
SLRSLAQKHNLLLFSDSSHSFGGSYNGQAIGSLADATIFSFHALKSITTAEGGALLTNDEELAHYARLLLSHGVEKKSLW
NYDCLLGGMNFRLSEVGAALGLSQLKKLDTFITHRHNIATLYDEAFKNNANFGIIAIPSHIRSSHHLYPILLYPHLWCQK
EHIFQQLQAQDLGVQVHYKPIYQFSLYKRLFGDISLPNADRFYLSEISIPCHQSLSTQQAQNIIEIITKTCK
>Mature_392_residues
MIPYSTQYIEQDDIEAVNFALESSHLTQGALTQEFEATLASKIGVQYAISFNSATSALFALYGAFMYKYFPHLAHFYNTL
DSKISKQDKEEIYFITTPISFVATTNMMLQWGITPLFCDVKDDGNIDEKALEHILSTHPKRAHIKAIVSVDYGGKSVEIS
SLRSLAQKHNLLLFSDSSHSFGGSYNGQAIGSLADATIFSFHALKSITTAEGGALLTNDEELAHYARLLLSHGVEKKSLW
NYDCLLGGMNFRLSEVGAALGLSQLKKLDTFITHRHNIATLYDEAFKNNANFGIIAIPSHIRSSHHLYPILLYPHLWCQK
EHIFQQLQAQDLGVQVHYKPIYQFSLYKRLFGDISLPNADRFYLSEISIPCHQSLSTQQAQNIIEIITKTCK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=394, Percent_Identity=27.6649746192893, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI2367285, Length=320, Percent_Identity=25.625, Blast_Score=95, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44029; Mature: 44029

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPYSTQYIEQDDIEAVNFALESSHLTQGALTQEFEATLASKIGVQYAISFNSATSALFA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHH
LYGAFMYKYFPHLAHFYNTLDSKISKQDKEEIYFITTPISFVATTNMMLQWGITPLFCDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHEECCCEEEEEC
KDDGNIDEKALEHILSTHPKRAHIKAIVSVDYGGKSVEISSLRSLAQKHNLLLFSDSSHS
CCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHCCEEEEECCCCC
FGGSYNGQAIGSLADATIFSFHALKSITTAEGGALLTNDEELAHYARLLLSHGVEKKSLW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCHHHCC
NYDCLLGGMNFRLSEVGAALGLSQLKKLDTFITHRHNIATLYDEAFKNNANFGIIAIPSH
CHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECHH
IRSSHHLYPILLYPHLWCQKEHIFQQLQAQDLGVQVHYKPIYQFSLYKRLFGDISLPNAD
HCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCC
RFYLSEISIPCHQSLSTQQAQNIIEIITKTCK
CEEEEECCCCHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPYSTQYIEQDDIEAVNFALESSHLTQGALTQEFEATLASKIGVQYAISFNSATSALFA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHH
LYGAFMYKYFPHLAHFYNTLDSKISKQDKEEIYFITTPISFVATTNMMLQWGITPLFCDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHEECCCEEEEEC
KDDGNIDEKALEHILSTHPKRAHIKAIVSVDYGGKSVEISSLRSLAQKHNLLLFSDSSHS
CCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHCCEEEEECCCCC
FGGSYNGQAIGSLADATIFSFHALKSITTAEGGALLTNDEELAHYARLLLSHGVEKKSLW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCHHHCC
NYDCLLGGMNFRLSEVGAALGLSQLKKLDTFITHRHNIATLYDEAFKNNANFGIIAIPSH
CHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECHH
IRSSHHLYPILLYPHLWCQKEHIFQQLQAQDLGVQVHYKPIYQFSLYKRLFGDISLPNAD
HCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCC
RFYLSEISIPCHQSLSTQQAQNIIEIITKTCK
CEEEEECCCCHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]