Click here to switch to the map view.

The map label for this gene is ymfQ [C]

Identifier: 30995455

GI number: 30995455

Start: 1590340

End: 1590900

Strand: Direct

Name: ymfQ [C]

Synonym: HI1521

Alternate gene names: 30995455

Gene position: 1590340-1590900 (Clockwise)

Preceding gene: 16273420

Following gene: 16273422

Centisome position: 86.9

GC content: 41.89

Gene sequence:

>561_bases
TTGCTCCCAGTAGGGTTAGCGTGGAAACGAGCGTTAGACAGCAATCTTGCCAAGGTGCTTGCCGTGCGTTGTGACCAACT
TGTAGAAGTCAATAGCAAAGCTCACACCCTCATCAAAGAGCGAATGCCGGGGCAAGCTACATTGTTACTTGAAGAATGGG
AAGGATTTTACGGCTTGCCCGAGTGTGGGCGGCAAATTGTAGGGAAAACGCTAGTACAACGACAAAAGCAAGTACAGGAA
AAAGAGAATGAAGTGGGGTCAAATAGCAAACGGTTCTTAGAAGAGATAGCAACCCAAGCTGGATTTAAAGTCAGAGTTGT
TAACCATTATCCACACCATTGCTTGCGAGATTGTACCTACCCACTTTATGAACAAGCAAACCATTGGCGCATTTTTATGT
ACACCCCAGCAGTATCATCTATTAGGTACGCAACTTGTTTAGATGATGTGGTGAAAAATTTAACCATATTTGAGCGTAAT
AAAGAGCTAGAGTGCTTGTTAAAACGTTATCAATACGCTCATTTAGAATTTGTATTTATCTATGAAGAGGAAACTCAATA
A

Upstream 100 bases:

>100_bases
TTTCCAACCGCAGATGTGCAATTGTTAAGCGATAACATCGCTATCCTAGGAGACATCGAATGGCTATGACCCACGCCAGT
ATTTAGACGCGGCGATAAAA

Downstream 100 bases:

>100_bases
TGTATCACTTAGACAATGATTCAGGGGTGTCAACGTTTGCCTTGGCCCCCGTTAAAAGCACACAGCGTCTTTGGTTTACC
GAAGGTGGTCATGGCAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLPVGLAWKRALDSNLAKVLAVRCDQLVEVNSKAHTLIKERMPGQATLLLEEWEGFYGLPECGRQIVGKTLVQRQKQVQE
KENEVGSNSKRFLEEIATQAGFKVRVVNHYPHHCLRDCTYPLYEQANHWRIFMYTPAVSSIRYATCLDDVVKNLTIFERN
KELECLLKRYQYAHLEFVFIYEEETQ

Sequences:

>Translated_186_residues
MLPVGLAWKRALDSNLAKVLAVRCDQLVEVNSKAHTLIKERMPGQATLLLEEWEGFYGLPECGRQIVGKTLVQRQKQVQE
KENEVGSNSKRFLEEIATQAGFKVRVVNHYPHHCLRDCTYPLYEQANHWRIFMYTPAVSSIRYATCLDDVVKNLTIFERN
KELECLLKRYQYAHLEFVFIYEEETQ
>Mature_186_residues
MLPVGLAWKRALDSNLAKVLAVRCDQLVEVNSKAHTLIKERMPGQATLLLEEWEGFYGLPECGRQIVGKTLVQRQKQVQE
KENEVGSNSKRFLEEIATQAGFKVRVVNHYPHHCLRDCTYPLYEQANHWRIFMYTPAVSSIRYATCLDDVVKNLTIFERN
KELECLLKRYQYAHLEFVFIYEEETQ

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 an E.coli YmfQ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 21753; Mature: 21753

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVGLAWKRALDSNLAKVLAVRCDQLVEVNSKAHTLIKERMPGQATLLLEEWEGFYGLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCH
ECGRQIVGKTLVQRQKQVQEKENEVGSNSKRFLEEIATQAGFKVRVVNHYPHHCLRDCTY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCC
PLYEQANHWRIFMYTPAVSSIRYATCLDDVVKNLTIFERNKELECLLKRYQYAHLEFVFI
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCEEEEEE
YEEETQ
EECCCC
>Mature Secondary Structure
MLPVGLAWKRALDSNLAKVLAVRCDQLVEVNSKAHTLIKERMPGQATLLLEEWEGFYGLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCH
ECGRQIVGKTLVQRQKQVQEKENEVGSNSKRFLEEIATQAGFKVRVVNHYPHHCLRDCTY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCC
PLYEQANHWRIFMYTPAVSSIRYATCLDDVVKNLTIFERNKELECLLKRYQYAHLEFVFI
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCEEEEEE
YEEETQ
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]