| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535257
Identifier: 308535257
GI number: 308535257
Start: 1926123
End: 1926944
Strand: Direct
Name: 308535257
Synonym: NA
Alternate gene names: NA
Gene position: 1926123-1926944 (Clockwise)
Preceding gene: 197118045
Following gene: 197118047
Centisome position: 41.73
GC content: 65.21
Gene sequence:
>822_bases GTGTCTGAGCCAGAGCAGAACATGGGCGCGGAGATGCCCGTCGGCCAGTACCTGAAGAGCGTGCGCGAATCGCGCGGACT CAAGCTGGAAGAGGCCTCCCAGGTAACCAAGATCGGCAAGAACTATCTGGTGGCGATCGAGGAAGGGCAGTTCGAGAAAC TCCCCAATGTCGCCTACATCAAGGGATTCCTAAGGCTTTACGCAGGTTTTCTCTCCCTTTCCGGCGACGAGATGGTCGCG AGGTACGAGCGCGAGCTGGTCCCGGCAGCGAAGCCGCAGGCAGAGCCCTCTCAGCCGCACCCGGGGATGGAGAACGTGGA AAAGGCGAAGCTCGCCAACCACGGGCGCTGGCTGATACCGGCGCTGCTGCTGGTCCTGGTGGTGCTCGCCGCGCTCTTTT ACTCCGACGGCGAACAACCTCCCCCTCCGCCGCGGCCGGCTCCCCCGGCGCCGGTCCCCGCACCGGTTATGGCCCCCATG ACGGCGCCGGTGCAAAAGCAGATCAGTTCGGCGCGCCGGGCGCCTCTGGCCGAGCCGGCGCCCGAGAGTCCGCAGAGTGC CGCTCCAGCCGGCAAGCAGCAAGGCGTGGTCCTGAAGCTGCGTTTCAACCGCGACAGCTGGCTCAGCATCACCATCGACG ACAGCATCTCCCAGCGCTACGACCTGAAGGCCGGCGACATCATCGAGTGGAAGGGACAGCGCTCTTTCTCCTTGGAACTG GGCGACGGCGGCGCCGTCGAAGGGGAATTCAACGGCAGGCCTTTGAAGGCGCTCGGGCAGGCCGGACAGCCGGCGCACGT CGATCTGAAAGCGGGACAATAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator Xre Family
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
NA
Sequences:
>Translated_273_residues MSEPEQNMGAEMPVGQYLKSVRESRGLKLEEASQVTKIGKNYLVAIEEGQFEKLPNVAYIKGFLRLYAGFLSLSGDEMVA RYERELVPAAKPQAEPSQPHPGMENVEKAKLANHGRWLIPALLLVLVVLAALFYSDGEQPPPPPRPAPPAPVPAPVMAPM TAPVQKQISSARRAPLAEPAPESPQSAAPAGKQQGVVLKLRFNRDSWLSITIDDSISQRYDLKAGDIIEWKGQRSFSLEL GDGGAVEGEFNGRPLKALGQAGQPAHVDLKAGQ >Mature_272_residues SEPEQNMGAEMPVGQYLKSVRESRGLKLEEASQVTKIGKNYLVAIEEGQFEKLPNVAYIKGFLRLYAGFLSLSGDEMVAR YERELVPAAKPQAEPSQPHPGMENVEKAKLANHGRWLIPALLLVLVVLAALFYSDGEQPPPPPRPAPPAPVPAPVMAPMT APVQKQISSARRAPLAEPAPESPQSAAPAGKQQGVVLKLRFNRDSWLSITIDDSISQRYDLKAGDIIEWKGQRSFSLELG DGGAVEGEFNGRPLKALGQAGQPAHVDLKAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29528; Mature: 29397
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPEQNMGAEMPVGQYLKSVRESRGLKLEEASQVTKIGKNYLVAIEEGQFEKLPNVAYI CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCHHHH KGFLRLYAGFLSLSGDEMVARYERELVPAAKPQAEPSQPHPGMENVEKAKLANHGRWLIP HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH ALLLVLVVLAALFYSDGEQPPPPPRPAPPAPVPAPVMAPMTAPVQKQISSARRAPLAEPA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC PESPQSAAPAGKQQGVVLKLRFNRDSWLSITIDDSISQRYDLKAGDIIEWKGQRSFSLEL CCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHCCCCCCCEEEECCCCEEEEEE GDGGAVEGEFNGRPLKALGQAGQPAHVDLKAGQ CCCCEECCCCCCCCHHHHCCCCCCCEEEECCCC >Mature Secondary Structure SEPEQNMGAEMPVGQYLKSVRESRGLKLEEASQVTKIGKNYLVAIEEGQFEKLPNVAYI CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCHHHH KGFLRLYAGFLSLSGDEMVARYERELVPAAKPQAEPSQPHPGMENVEKAKLANHGRWLIP HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH ALLLVLVVLAALFYSDGEQPPPPPRPAPPAPVPAPVMAPMTAPVQKQISSARRAPLAEPA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC PESPQSAAPAGKQQGVVLKLRFNRDSWLSITIDDSISQRYDLKAGDIIEWKGQRSFSLEL CCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHCCCCCCCEEEECCCCEEEEEE GDGGAVEGEFNGRPLKALGQAGQPAHVDLKAGQ CCCCEECCCCCCCCHHHHCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA