| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yhjX [H]
Identifier: 308535218
GI number: 308535218
Start: 1322358
End: 1322948
Strand: Direct
Name: yhjX [H]
Synonym: NA
Alternate gene names: 308535218
Gene position: 1322358-1322948 (Clockwise)
Preceding gene: 197117533
Following gene: 197117534
Centisome position: 28.65
GC content: 62.27
Gene sequence:
>591_bases ATGTCCAAAACAACATCTAACAAGGGGTGGCAGGTAGTCATGGCCGGAACCGGAATCAACCTGGCGCTCGGGGTGCTGTA TGCCTGGAGTATCTTCAAGGGTGCCATCAAGGCGTCCATCGAAAAAGGCGGCCCCGATGCGTTCCAGTGGAGCCTGAGTT CCATCAACGACCCGTATGCTCTTTGCTGTCTCGCTTTTGCTTTTTCCATGATCCTTGCCGGCAAATGCCAGGACAAGATC GGCCCGGCTAAGACCGCGTTGATCGGCGGCATCCTGGTCGGCGCCGGCTTCAGCCTCATGGGCTACTCCAACAGCTACGC AGCCTGGGTCACCGGCTTCGGCGTCCTGGCCGGCTCCGGCTTCGGTTTCGGCTACTCCGCCGCCACCCCTCCGGCGCTCA AGTGGTTCTCGTCCAAGAAAACCGGCCTCATCGCCGGCATCGTGGTCGCTGGCTTCGGGCTCGCGCCGGTGTACATCGCG CCGCTCTCCAGCTACCTCTTGGGCGCTTACGGCATCCAGCAGTCCATGTACATCCTCGCCGCCGGCTTCGCCGTCATCGT CTGCGGCCTCTCCTTCGCCTTGGCCAACCCC
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: oxalate/formate antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
NA
Sequences:
>Translated_197_residues MSKTTSNKGWQVVMAGTGINLALGVLYAWSIFKGAIKASIEKGGPDAFQWSLSSINDPYALCCLAFAFSMILAGKCQDKI GPAKTALIGGILVGAGFSLMGYSNSYAAWVTGFGVLAGSGFGFGYSAATPPALKWFSSKKTGLIAGIVVAGFGLAPVYIA PLSSYLLGAYGIQQSMYILAAGFAVIVCGLSFALANP >Mature_196_residues SKTTSNKGWQVVMAGTGINLALGVLYAWSIFKGAIKASIEKGGPDAFQWSLSSINDPYALCCLAFAFSMILAGKCQDKIG PAKTALIGGILVGAGFSLMGYSNSYAAWVTGFGVLAGSGFGFGYSAATPPALKWFSSKKTGLIAGIVVAGFGLAPVYIAP LSSYLLGAYGIQQSMYILAAGFAVIVCGLSFALANP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=179, Percent_Identity=29.0502793296089, Blast_Score=74, Evalue=8e-15, Organism=Drosophila melanogaster, GI281360217, Length=113, Percent_Identity=34.5132743362832, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI28573971, Length=113, Percent_Identity=34.5132743362832, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 20197; Mature: 20066
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTTSNKGWQVVMAGTGINLALGVLYAWSIFKGAIKASIEKGGPDAFQWSLSSINDPYA CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCHHH LCCLAFAFSMILAGKCQDKIGPAKTALIGGILVGAGFSLMGYSNSYAAWVTGFGVLAGSG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCC FGFGYSAATPPALKWFSSKKTGLIAGIVVAGFGLAPVYIAPLSSYLLGAYGIQQSMYILA CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGFAVIVCGLSFALANP HHHHHHHHHHHHHHCCC >Mature Secondary Structure SKTTSNKGWQVVMAGTGINLALGVLYAWSIFKGAIKASIEKGGPDAFQWSLSSINDPYA CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCHHH LCCLAFAFSMILAGKCQDKIGPAKTALIGGILVGAGFSLMGYSNSYAAWVTGFGVLAGSG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCC FGFGYSAATPPALKWFSSKKTGLIAGIVVAGFGLAPVYIAPLSSYLLGAYGIQQSMYILA CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGFAVIVCGLSFALANP HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]