Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 308535204

Identifier: 308535204

GI number: 308535204

Start: 1129344

End: 1129682

Strand: Direct

Name: 308535204

Synonym: NA

Alternate gene names: NA

Gene position: 1129344-1129682 (Clockwise)

Preceding gene: 197117360

Following gene: 197117361

Centisome position: 24.47

GC content: 52.8

Gene sequence:

>339_bases
GTGAAGATCTACTCTCTCGGAGTTGTTTCTATTTTGCTTCTTTCAACGGGCTGCGCCTCAAAGAGCTTTGTGCAGAAGCA
TCTCGACCCCATCAGTTGCAGAGTCGACGTCCTCGAAAATCAAAATGCTTCTCTTCAGAGCAAAGCTGATTCACTTGAGG
CCCGCGTAGCTGCTTTAGAAACCCAGGTGAGCCAAGCCCAACTGGCAAATAAAGCGATGCTGGATGAAGCGACTGCCACG
GCATCGGCGAGCGCACAAAGGGCTGAAGCTGCCGCTGCTGCGGCCGAACAGTCTGCGCAGCGGGCCCAGAAGATCTTTGA
ACTGAACCAGAAGAAGTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:
NA

Sequences:

>Translated_112_residues
MKIYSLGVVSILLLSTGCASKSFVQKHLDPISCRVDVLENQNASLQSKADSLEARVAALETQVSQAQLANKAMLDEATAT
ASASAQRAEAAAAAAEQSAQRAQKIFELNQKK
>Mature_112_residues
MKIYSLGVVSILLLSTGCASKSFVQKHLDPISCRVDVLENQNASLQSKADSLEARVAALETQVSQAQLANKAMLDEATAT
ASASAQRAEAAAAAAEQSAQRAQKIFELNQKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11849; Mature: 11849

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYSLGVVSILLLSTGCASKSFVQKHLDPISCRVDVLENQNASLQSKADSLEARVAALE
CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TQVSQAQLANKAMLDEATATASASAQRAEAAAAAAEQSAQRAQKIFELNQKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIYSLGVVSILLLSTGCASKSFVQKHLDPISCRVDVLENQNASLQSKADSLEARVAALE
CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TQVSQAQLANKAMLDEATATASASAQRAEAAAAAAEQSAQRAQKIFELNQKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA