Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 308513326

Identifier: 308513326

GI number: 308513326

Start: 2891317

End: 2892282

Strand: Reverse

Name: 308513326

Synonym: NA

Alternate gene names: NA

Gene position: 2892282-2891317 (Counterclockwise)

Preceding gene: 39997721

Following gene: 39997714

Centisome position: 75.83

GC content: 64.29

Gene sequence:

>966_bases
GTGCGGTTCGCGCTGCCGGCCCCCGTCCGTCGCGTCGGCGAAGCCCTTTCCGTGGGCGGCAGGGTTCTGCGCCGCCTGAC
CATTGCCTCCCCTTCAACCGTGACGGTCAATGGCAAGCGGTATCGGGGCATCATCGAGCTGGTCCCGGCGGACAAGGGGA
TACTCGTCATCAACGAGCTCCCCCTCGAAGATTACCTGGTGGGGCTCATCAATTGCGAGATATCGTCCCAATGGCCCATG
GAGTCGGTCAAAGCCCAGGCCGTGGTGGCGCGTACCTATGCGGTCTACCAGAAGAAGGCCCGCGCCGGCGCCGCCTATCA
CCTGGAGTCCACGGTCCTCGATCAGGTCTACGGCGGGTGCGAGATTGAAGACAGCAGGGCCGCCCGCGGGGTGCGCGAAA
CCGCAGGAGAGATACTCACCTGGGCGGGGCAGCCGATCCAGGCCTTCTACCATTCCAACTGCGGCGGCCGGACCGAGGTG
GCGGAAAACGTCTGGGGCTTCAAGCTTCCCTACCTCAAGAGCGTTGACTGCGCCTATTGCTCGGATACGCCCTCAACCCG
CTGGGAACAGACCCTGCCCCTGAAGAAGCTCGAATCGCTCCTTCGGGGGGCGGGCATCGCTGTGTCCGGGCTCAGAGATA
TCAGGGAAGGCAAGCGCAACAACAGCGGCCGTCTCACCGAGCTGGTACTGGTGTCGTCCCGCGGGAGCACCGCGGTCCCG
GCGGTCACGTTCCGAAAGATCGTCGGCTACACTGTTATCAAGAGCACCAACTTCCTGGTGAAGGTGCGGGGTGACGAAGC
CGTGTTCACGGGCATGGGCTACGGCCACGGGGTCGGCCTCTGCCAGTGGGGGGCCAAGCAGCGGGCCTCGGACGGATTCA
GCTACCGTGAGATCCTGTCCTACTATTTCCCGGAAGCGGTGCTCACGCGCATGGACGATGGACAGGGGAGCGATGCTCGT
TACTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: stage II sporulation-related protein

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:
NA

Sequences:

>Translated_321_residues
MRFALPAPVRRVGEALSVGGRVLRRLTIASPSTVTVNGKRYRGIIELVPADKGILVINELPLEDYLVGLINCEISSQWPM
ESVKAQAVVARTYAVYQKKARAGAAYHLESTVLDQVYGGCEIEDSRAARGVRETAGEILTWAGQPIQAFYHSNCGGRTEV
AENVWGFKLPYLKSVDCAYCSDTPSTRWEQTLPLKKLESLLRGAGIAVSGLRDIREGKRNNSGRLTELVLVSSRGSTAVP
AVTFRKIVGYTVIKSTNFLVKVRGDEAVFTGMGYGHGVGLCQWGAKQRASDGFSYREILSYYFPEAVLTRMDDGQGSDAR
Y
>Mature_321_residues
MRFALPAPVRRVGEALSVGGRVLRRLTIASPSTVTVNGKRYRGIIELVPADKGILVINELPLEDYLVGLINCEISSQWPM
ESVKAQAVVARTYAVYQKKARAGAAYHLESTVLDQVYGGCEIEDSRAARGVRETAGEILTWAGQPIQAFYHSNCGGRTEV
AENVWGFKLPYLKSVDCAYCSDTPSTRWEQTLPLKKLESLLRGAGIAVSGLRDIREGKRNNSGRLTELVLVSSRGSTAVP
AVTFRKIVGYTVIKSTNFLVKVRGDEAVFTGMGYGHGVGLCQWGAKQRASDGFSYREILSYYFPEAVLTRMDDGQGSDAR
Y

Specific function: Might be involved in sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 35170; Mature: 35170

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFALPAPVRRVGEALSVGGRVLRRLTIASPSTVTVNGKRYRGIIELVPADKGILVINEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCEEEEECCCCCEEEEECC
PLEDYLVGLINCEISSQWPMESVKAQAVVARTYAVYQKKARAGAAYHLESTVLDQVYGGC
CHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCC
EIEDSRAARGVRETAGEILTWAGQPIQAFYHSNCGGRTEVAENVWGFKLPYLKSVDCAYC
CCCHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCEEC
SDTPSTRWEQTLPLKKLESLLRGAGIAVSGLRDIREGKRNNSGRLTELVLVSSRGSTAVP
CCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCH
AVTFRKIVGYTVIKSTNFLVKVRGDEAVFTGMGYGHGVGLCQWGAKQRASDGFSYREILS
HHHHHHHHHHHEEECCCEEEEECCCCEEEECCCCCCCCCHHHCCCHHHCCCCCCHHHHHH
YYFPEAVLTRMDDGQGSDARY
HHCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRFALPAPVRRVGEALSVGGRVLRRLTIASPSTVTVNGKRYRGIIELVPADKGILVINEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCEEEEECCCCCEEEEECC
PLEDYLVGLINCEISSQWPMESVKAQAVVARTYAVYQKKARAGAAYHLESTVLDQVYGGC
CHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCC
EIEDSRAARGVRETAGEILTWAGQPIQAFYHSNCGGRTEVAENVWGFKLPYLKSVDCAYC
CCCHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCEEC
SDTPSTRWEQTLPLKKLESLLRGAGIAVSGLRDIREGKRNNSGRLTELVLVSSRGSTAVP
CCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCH
AVTFRKIVGYTVIKSTNFLVKVRGDEAVFTGMGYGHGVGLCQWGAKQRASDGFSYREILS
HHHHHHHHHHHEEECCCEEEEECCCCEEEECCCCCCCCCHHHCCCHHHCCCCCCHHHHHH
YYFPEAVLTRMDDGQGSDARY
HHCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA