| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 308513326
Identifier: 308513326
GI number: 308513326
Start: 2891317
End: 2892282
Strand: Reverse
Name: 308513326
Synonym: NA
Alternate gene names: NA
Gene position: 2892282-2891317 (Counterclockwise)
Preceding gene: 39997721
Following gene: 39997714
Centisome position: 75.83
GC content: 64.29
Gene sequence:
>966_bases GTGCGGTTCGCGCTGCCGGCCCCCGTCCGTCGCGTCGGCGAAGCCCTTTCCGTGGGCGGCAGGGTTCTGCGCCGCCTGAC CATTGCCTCCCCTTCAACCGTGACGGTCAATGGCAAGCGGTATCGGGGCATCATCGAGCTGGTCCCGGCGGACAAGGGGA TACTCGTCATCAACGAGCTCCCCCTCGAAGATTACCTGGTGGGGCTCATCAATTGCGAGATATCGTCCCAATGGCCCATG GAGTCGGTCAAAGCCCAGGCCGTGGTGGCGCGTACCTATGCGGTCTACCAGAAGAAGGCCCGCGCCGGCGCCGCCTATCA CCTGGAGTCCACGGTCCTCGATCAGGTCTACGGCGGGTGCGAGATTGAAGACAGCAGGGCCGCCCGCGGGGTGCGCGAAA CCGCAGGAGAGATACTCACCTGGGCGGGGCAGCCGATCCAGGCCTTCTACCATTCCAACTGCGGCGGCCGGACCGAGGTG GCGGAAAACGTCTGGGGCTTCAAGCTTCCCTACCTCAAGAGCGTTGACTGCGCCTATTGCTCGGATACGCCCTCAACCCG CTGGGAACAGACCCTGCCCCTGAAGAAGCTCGAATCGCTCCTTCGGGGGGCGGGCATCGCTGTGTCCGGGCTCAGAGATA TCAGGGAAGGCAAGCGCAACAACAGCGGCCGTCTCACCGAGCTGGTACTGGTGTCGTCCCGCGGGAGCACCGCGGTCCCG GCGGTCACGTTCCGAAAGATCGTCGGCTACACTGTTATCAAGAGCACCAACTTCCTGGTGAAGGTGCGGGGTGACGAAGC CGTGTTCACGGGCATGGGCTACGGCCACGGGGTCGGCCTCTGCCAGTGGGGGGCCAAGCAGCGGGCCTCGGACGGATTCA GCTACCGTGAGATCCTGTCCTACTATTTCCCGGAAGCGGTGCTCACGCGCATGGACGATGGACAGGGGAGCGATGCTCGT TACTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: stage II sporulation-related protein
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
NA
Sequences:
>Translated_321_residues MRFALPAPVRRVGEALSVGGRVLRRLTIASPSTVTVNGKRYRGIIELVPADKGILVINELPLEDYLVGLINCEISSQWPM ESVKAQAVVARTYAVYQKKARAGAAYHLESTVLDQVYGGCEIEDSRAARGVRETAGEILTWAGQPIQAFYHSNCGGRTEV AENVWGFKLPYLKSVDCAYCSDTPSTRWEQTLPLKKLESLLRGAGIAVSGLRDIREGKRNNSGRLTELVLVSSRGSTAVP AVTFRKIVGYTVIKSTNFLVKVRGDEAVFTGMGYGHGVGLCQWGAKQRASDGFSYREILSYYFPEAVLTRMDDGQGSDAR Y >Mature_321_residues MRFALPAPVRRVGEALSVGGRVLRRLTIASPSTVTVNGKRYRGIIELVPADKGILVINELPLEDYLVGLINCEISSQWPM ESVKAQAVVARTYAVYQKKARAGAAYHLESTVLDQVYGGCEIEDSRAARGVRETAGEILTWAGQPIQAFYHSNCGGRTEV AENVWGFKLPYLKSVDCAYCSDTPSTRWEQTLPLKKLESLLRGAGIAVSGLRDIREGKRNNSGRLTELVLVSSRGSTAVP AVTFRKIVGYTVIKSTNFLVKVRGDEAVFTGMGYGHGVGLCQWGAKQRASDGFSYREILSYYFPEAVLTRMDDGQGSDAR Y
Specific function: Might be involved in sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 35170; Mature: 35170
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFALPAPVRRVGEALSVGGRVLRRLTIASPSTVTVNGKRYRGIIELVPADKGILVINEL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCEEEEECCCCCEEEEECC PLEDYLVGLINCEISSQWPMESVKAQAVVARTYAVYQKKARAGAAYHLESTVLDQVYGGC CHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCC EIEDSRAARGVRETAGEILTWAGQPIQAFYHSNCGGRTEVAENVWGFKLPYLKSVDCAYC CCCHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCEEC SDTPSTRWEQTLPLKKLESLLRGAGIAVSGLRDIREGKRNNSGRLTELVLVSSRGSTAVP CCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCH AVTFRKIVGYTVIKSTNFLVKVRGDEAVFTGMGYGHGVGLCQWGAKQRASDGFSYREILS HHHHHHHHHHHEEECCCEEEEECCCCEEEECCCCCCCCCHHHCCCHHHCCCCCCHHHHHH YYFPEAVLTRMDDGQGSDARY HHCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRFALPAPVRRVGEALSVGGRVLRRLTIASPSTVTVNGKRYRGIIELVPADKGILVINEL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCEEEEECCCCCEEEEECC PLEDYLVGLINCEISSQWPMESVKAQAVVARTYAVYQKKARAGAAYHLESTVLDQVYGGC CHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCC EIEDSRAARGVRETAGEILTWAGQPIQAFYHSNCGGRTEVAENVWGFKLPYLKSVDCAYC CCCHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCEEC SDTPSTRWEQTLPLKKLESLLRGAGIAVSGLRDIREGKRNNSGRLTELVLVSSRGSTAVP CCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCH AVTFRKIVGYTVIKSTNFLVKVRGDEAVFTGMGYGHGVGLCQWGAKQRASDGFSYREILS HHHHHHHHHHHEEECCCEEEEECCCCEEEECCCCCCCCCHHHCCCHHHCCCCCCHHHHHH YYFPEAVLTRMDDGQGSDARY HHCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA