| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is ppdD [C]
Identifier: 308513307
GI number: 308513307
Start: 1939853
End: 1940266
Strand: Reverse
Name: ppdD [C]
Synonym: NA
Alternate gene names: 308513307
Gene position: 1940266-1939853 (Counterclockwise)
Preceding gene: 39996876
Following gene: 39996874
Centisome position: 50.87
GC content: 51.93
Gene sequence:
>414_bases ATGCTGAAACGTTTTCGTAACCGCAAGGGGTTTACCCTCATTGAGCTGATGATCGTCGTGACCATCATCGGCATTCTCGC GGCAATTGCCGTCCCCAACTACAGGTGGGGGCTCATCAGGGCTCGTGAGGCTGTCCTGCAGGAAAACCTCTACACCATGC GCAGTGCCATAGATCAGTACTATGCGGATCAGGGGAAATATCCCGACACCCTTGACGAGTTGGCGGAAAAACGGTATGTC AAATCAATCCCCAATGACCCGTTTACCGGTAAGAATGACACATGGGTTACCGTAAAGCCTATTGAGCCCACCGGCGAAAT TCATACTACCGAGGAGATCAAGGGTAATGTGGCGGATGTGCACAGCGGCTCAGACCTTGTCAGTTCAAAAGGTACTCCGT ACAAGGACTGGTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: pilin domain-containing protein
Products: NA
Alternate protein names: General Secretion Pathway Protein G; N-Terminal Methylation; Secretion Protein; Methylation; Pilus Assembly Protein; General Secretion Pathway GSPG-Like Transmembrane Protein; General Secretion Pathway GSPG-Like; GSPG-Related Protein; N-Terminal Methylation Site; Type II Secretion System Pseudopilin OxpG; Pilin Domain-Containing Protein; Type II Secretion System Protein; General Secretion Pathway Protein; N-Terminal Methylation Motif Domain Protein; Fimbrial Protein Pilin; Prokaryotic N-Terminal Methylation Site
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
NA
Sequences:
>Translated_137_residues MLKRFRNRKGFTLIELMIVVTIIGILAAIAVPNYRWGLIRAREAVLQENLYTMRSAIDQYYADQGKYPDTLDELAEKRYV KSIPNDPFTGKNDTWVTVKPIEPTGEIHTTEEIKGNVADVHSGSDLVSSKGTPYKDW >Mature_137_residues MLKRFRNRKGFTLIELMIVVTIIGILAAIAVPNYRWGLIRAREAVLQENLYTMRSAIDQYYADQGKYPDTLDELAEKRYV KSIPNDPFTGKNDTWVTVKPIEPTGEIHTTEEIKGNVADVHSGSDLVSSKGTPYKDW
Specific function: Not Yet Known. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15575; Mature: 15575
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRFRNRKGFTLIELMIVVTIIGILAAIAVPNYRWGLIRAREAVLQENLYTMRSAIDQY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YADQGKYPDTLDELAEKRYVKSIPNDPFTGKNDTWVTVKPIEPTGEIHTTEEIKGNVADV HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCC HSGSDLVSSKGTPYKDW CCCCHHHHCCCCCCCCC >Mature Secondary Structure MLKRFRNRKGFTLIELMIVVTIIGILAAIAVPNYRWGLIRAREAVLQENLYTMRSAIDQY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YADQGKYPDTLDELAEKRYVKSIPNDPFTGKNDTWVTVKPIEPTGEIHTTEEIKGNVADV HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCC HSGSDLVSSKGTPYKDW CCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA