Click here to switch to the map view.

The map label for this gene is yaaH [H]

Identifier: 30263490

GI number: 30263490

Start: 3301364

End: 3301984

Strand: Reverse

Name: yaaH [H]

Synonym: BA_3597

Alternate gene names: 30263490

Gene position: 3301984-3301364 (Counterclockwise)

Preceding gene: 30263491

Following gene: 30263489

Centisome position: 63.17

GC content: 36.07

Gene sequence:

>621_bases
ATGAGCAATCAAACAACTACACATCATGTGAAAATGACAACAGCAGATCCATCAGGAATTGGTCTATTTGGATTAGCGAT
GGTAACACTTGTAGCATCATCTCAAAAGTTAGGCTTAACAGATGGCGTTTCACTAGTATTACCGTGGGCAATCTTTTTAG
GAGGATTTGCACAAATCTTTGCGTGCATTCACGATGCAAAGCATAATAATACGTTCGGTACAACAGCATTTGGTGCATAC
GGCCTATTTTGGTTAGGTGTTGGGATGACTTGGTTAATTCAACTTGGAGTATTTGGCGAAAAATTAGCACAAGCTGCAGA
TTCAAAACAGCTTGGTGTAGCCTTTATCGGATATTTGATTTTCACAATTTTTATGACAATTGGTGCAATGGAAACACATA
AAGTATTATTTATGATTTTCGTCCTTATTGATTTCTTATTTATCGGTCTTTCATTAAGTACTTTAGGTGTTATGCCGCAT
GCGATGCATAATTTAGCAGCATATTCAGAACTTCTTATTTCATTATTATCTTTCTATGGTTCAGCAGCAGCAGTGTTAAA
TACACACTTCGGAAAAGTTGTTTTACCAGTTGGAAAGCCGTTTGGTATTTTTAAAAAGTAA

Upstream 100 bases:

>100_bases
CATTATAAAATATAAGGTCTGACAACATACAAAAAAACCATTGACATAGTCTTCTGATTTAAGTATTGTATTCGAGTATG
TTTATAATCAGGAGGTTTAT

Downstream 100 bases:

>100_bases
TAAAAAAGCACAGATGATTGTATAGTCATCTGTGCTTTTTTTATGAAGTAAACAGAAATAATAAAAAATACAATTGAAAT
TGATTCTCATTATTAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSNQTTTHHVKMTTADPSGIGLFGLAMVTLVASSQKLGLTDGVSLVLPWAIFLGGFAQIFACIHDAKHNNTFGTTAFGAY
GLFWLGVGMTWLIQLGVFGEKLAQAADSKQLGVAFIGYLIFTIFMTIGAMETHKVLFMIFVLIDFLFIGLSLSTLGVMPH
AMHNLAAYSELLISLLSFYGSAAAVLNTHFGKVVLPVGKPFGIFKK

Sequences:

>Translated_206_residues
MSNQTTTHHVKMTTADPSGIGLFGLAMVTLVASSQKLGLTDGVSLVLPWAIFLGGFAQIFACIHDAKHNNTFGTTAFGAY
GLFWLGVGMTWLIQLGVFGEKLAQAADSKQLGVAFIGYLIFTIFMTIGAMETHKVLFMIFVLIDFLFIGLSLSTLGVMPH
AMHNLAAYSELLISLLSFYGSAAAVLNTHFGKVVLPVGKPFGIFKK
>Mature_205_residues
SNQTTTHHVKMTTADPSGIGLFGLAMVTLVASSQKLGLTDGVSLVLPWAIFLGGFAQIFACIHDAKHNNTFGTTAFGAYG
LFWLGVGMTWLIQLGVFGEKLAQAADSKQLGVAFIGYLIFTIFMTIGAMETHKVLFMIFVLIDFLFIGLSLSTLGVMPHA
MHNLAAYSELLISLLSFYGSAAAVLNTHFGKVVLPVGKPFGIFKK

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=186, Percent_Identity=33.8709677419355, Blast_Score=88, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6324329, Length=145, Percent_Identity=30.3448275862069, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 22113; Mature: 21981

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQTTTHHVKMTTADPSGIGLFGLAMVTLVASSQKLGLTDGVSLVLPWAIFLGGFAQIF
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ACIHDAKHNNTFGTTAFGAYGLFWLGVGMTWLIQLGVFGEKLAQAADSKQLGVAFIGYLI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FTIFMTIGAMETHKVLFMIFVLIDFLFIGLSLSTLGVMPHAMHNLAAYSELLISLLSFYG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SAAAVLNTHFGKVVLPVGKPFGIFKK
CHHHHHHHCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
SNQTTTHHVKMTTADPSGIGLFGLAMVTLVASSQKLGLTDGVSLVLPWAIFLGGFAQIF
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ACIHDAKHNNTFGTTAFGAYGLFWLGVGMTWLIQLGVFGEKLAQAADSKQLGVAFIGYLI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FTIFMTIGAMETHKVLFMIFVLIDFLFIGLSLSTLGVMPHAMHNLAAYSELLISLLSFYG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SAAAVLNTHFGKVVLPVGKPFGIFKK
CHHHHHHHCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]