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The map label for this gene is ybxG [H]

Identifier: 30263418

GI number: 30263418

Start: 3227492

End: 3228883

Strand: Reverse

Name: ybxG [H]

Synonym: BA_3516

Alternate gene names: 30263418

Gene position: 3228883-3227492 (Counterclockwise)

Preceding gene: 30263419

Following gene: 30263417

Centisome position: 61.77

GC content: 38.72

Gene sequence:

>1392_bases
GTGGCAAACAAAGAATTGAAAAGAGGTTTAGAAGCACGTCATATTCAAATGATTGCTTTAGGCGGAACGATTGGTGTTGG
TTTGTTTATGGGGTCAGCCAGCACAATTAAATGGACAGGTCCGTCAGTTATGCTTGCGTATGCAATTGCAGGTATTTTTA
TCTTCTTCATCATGCGTGCCATGGGAGAAATGTTGTATATGGAGCCAAGTACAGGTTCATTTGCGACATTCGGTCATAAG
TATATTCATCCGCTAGCTGGTTATATGACAGCGTGGAGCAACTGGTTCCAGTGGGTTATCGTTGGGATGTCAGAGATTAT
CGCGGTTGGAGCGTATATGCAATATTGGTTCCCGGATTTACCAGCTTGGATACCAGGTGTAATCGCAATGGTTATTCTTG
GCGCAGCTAACTTAATTTCTGTTAAGTCATTTGGTGAATTTGAATTTTGGTTTGCGATGATTAAAATCGTTACGATTCTA
TTAATGATTATTGCGGGATTTGGACTTATTTTCTTTGGAATTGGTAACGGCGGAGAAGCGATTGGCATATCGAATCTTTG
GTCAAATGGCGGTTTCTTTACAGGTGGTTTTTCTGGATTCTTCTTTGCATTATCACTTGTAGTTGGAGCGTATCAAGGTG
TGGAATTAATCGGTATTACTGCTGGTGAAGCGAAGGATCCGAAGAAGACACTTACAAGAGCGATTCAAAGTACAATTTGG
CGTATTTTAATTTTCTACATCGGTGCGATTTTCGTTATTGTAACTGTGTATCCGTGGGATCAATTAAGTACAATTGGAAG
TCCATTCGTAGCAACTTTTGCGAAAGTTGGTATTACGGCTGCTGCGGGATTAATTAACTTTGTTGTTATCACAGCAGCAA
TGTCTGGTTGTAATAGTGGTATTTATAGTGCTGGTCGTATGCTATATACGTTAGGTGTAAATGGACAAGCACCGAAATAT
TTCACGAAACTTTCTGGAAATGGTGTACCTTTATTCGGTACAGTTGGCGTAATTATCGGTTTAGCGGTCGGTGTAGTTCT
AAGTTATATTGCACCAAAAAACTTATTCGTATATGTATATAGTGCGAGTGTACTTCCTGGTATGGTACCATGGTTTGTCA
TTTTAATTAGCCAAATTAATTTTAGAAAAGAAAAGGGAGCAGAGATGAAAGATCATCCGTTCAAAATGCCGTTTGCTCCT
GTTACAAACTATTTAACAATTGCCTTTTTAATTATGGTATTAGTCGGAATGTGGTTTAACGATGATACGCGTATTTCATT
AGTTGTAGGTATTGTTTTCTTAGCTATCGTAACAATTAGTTTCTATGCTTTCGGAATAGGGAAACGACCTCCGTTAGATG
TTCCAAATGATCAAGAGATTTCAAGCAAATAA

Upstream 100 bases:

>100_bases
AAAATGACGTTTGCTTCATCATTTTCAGGGCCGAAAGGAATTAGGGGAAAGCATCTTGTTTTAAAATGCGGCTATGAATC
ATCTAAGAGGGGGAAGTGAA

Downstream 100 bases:

>100_bases
AGATAGTAAAAAGTCCGATTTCTAAATGAGAAATCGGACTTTTTGTTATTAAAACTTTTCTAAAACGATTTTCCCAATTG
TACTTCCGCTTTCAAGCAGA

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPSTGSFATFGHK
YIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTIL
LMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTLTRAIQSTIW
RILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTLGVNGQAPKY
FTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAP
VTNYLTIAFLIMVLVGMWFNDDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK

Sequences:

>Translated_463_residues
MANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPSTGSFATFGHK
YIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTIL
LMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTLTRAIQSTIW
RILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTLGVNGQAPKY
FTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAP
VTNYLTIAFLIMVLVGMWFNDDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK
>Mature_462_residues
ANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPSTGSFATFGHKY
IHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILL
MIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTLTRAIQSTIWR
ILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTLGVNGQAPKYF
TKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPV
TNYLTIAFLIMVLVGMWFNDDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994972, Length=450, Percent_Identity=62, Blast_Score=563, Evalue=1e-161,
Organism=Escherichia coli, GI1786789, Length=455, Percent_Identity=43.7362637362637, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1786602, Length=439, Percent_Identity=47.380410022779, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI1790653, Length=432, Percent_Identity=44.4444444444444, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1786302, Length=438, Percent_Identity=40.4109589041096, Blast_Score=341, Evalue=7e-95,
Organism=Escherichia coli, GI87081915, Length=454, Percent_Identity=36.784140969163, Blast_Score=291, Evalue=5e-80,
Organism=Escherichia coli, GI87081708, Length=441, Percent_Identity=36.5079365079365, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI1788480, Length=412, Percent_Identity=37.8640776699029, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI1789017, Length=427, Percent_Identity=34.8946135831382, Blast_Score=261, Evalue=5e-71,
Organism=Escherichia coli, GI87082023, Length=476, Percent_Identity=25.6302521008403, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081869, Length=403, Percent_Identity=23.5732009925558, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6324061, Length=439, Percent_Identity=34.1685649202733, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6320772, Length=444, Percent_Identity=33.3333333333333, Blast_Score=210, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6324990, Length=428, Percent_Identity=32.9439252336449, Blast_Score=193, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6324059, Length=438, Percent_Identity=31.7351598173516, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6324924, Length=413, Percent_Identity=31.2348668280872, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6322892, Length=418, Percent_Identity=31.1004784688995, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6322967, Length=410, Percent_Identity=28.780487804878, Blast_Score=160, Evalue=6e-40,
Organism=Saccharomyces cerevisiae, GI6324553, Length=403, Percent_Identity=31.5136476426799, Blast_Score=159, Evalue=6e-40,
Organism=Saccharomyces cerevisiae, GI6321053, Length=420, Percent_Identity=28.5714285714286, Blast_Score=157, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6321629, Length=416, Percent_Identity=26.9230769230769, Blast_Score=155, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6319824, Length=398, Percent_Identity=29.6482412060301, Blast_Score=153, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6319608, Length=421, Percent_Identity=28.2660332541568, Blast_Score=153, Evalue=7e-38,
Organism=Saccharomyces cerevisiae, GI6320251, Length=400, Percent_Identity=28.5, Blast_Score=149, Evalue=8e-37,
Organism=Saccharomyces cerevisiae, GI6319543, Length=410, Percent_Identity=26.3414634146341, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6320717, Length=398, Percent_Identity=26.6331658291457, Blast_Score=145, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6319542, Length=397, Percent_Identity=26.9521410579345, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6324981, Length=413, Percent_Identity=29.0556900726392, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6320364, Length=499, Percent_Identity=23.2464929859719, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50213; Mature: 50082

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRA
CCCHHHHCCCHHHEEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
MGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDL
HHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIFFGIGNGGEA
CHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE
IGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTLTRAIQSTIW
EEEHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSG
HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IYSAGRMLYTLGVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVY
HHHCCCEEEEECCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPVTNYLTIAFLIMVLVGMWFN
ECHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRA
CCHHHHCCCHHHEEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
MGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDL
HHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIFFGIGNGGEA
CHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE
IGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTLTRAIQSTIW
EEEHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSG
HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IYSAGRMLYTLGVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVY
HHHCCCEEEEECCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPVTNYLTIAFLIMVLVGMWFN
ECHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9016963 [H]