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The map label for this gene is gerKC

Identifier: 30260787

GI number: 30260787

Start: 650002

End: 651126

Strand: Reverse

Name: gerKC

Synonym: BA_0633

Alternate gene names: NA

Gene position: 651126-650002 (Counterclockwise)

Preceding gene: 30260788

Following gene: 30260783

Centisome position: 12.46

GC content: 32.44

Gene sequence:

>1125_bases
ATGTTCAAAAAAAGAGTTAAACTACTTTTTATATTATGTACTAGTGCATTCCTTTCTGGCTGCTGGGATCAAGAACCATT
AAGGGAAGCAAGGTTAGCTTATAGTATTGGATCTGATATTACGGAAGAGAATAAACTCCAGCAAACAATTGAGCTCGTAA
AAAGTTCAAGCGGAGAACAAGCTTCATTCGAGAATGAAATACATTCTGCAACCGGGCATAACATAAGAGATACGAGCGAT
GCACTGAAAAAAAATGTAACGGGAAACATTCGTTATTTCAAATATGGTGTTCAATTACTAGGAACCAAAATTCTAAAAAA
AGGTGTACTACCTTATTTAGATGTCAGCTTTCGGGACCCAACAAACCCAACTGCTTTAGTAAAACTTATTGCAGTAGATG
GTGAAACATCCGAGATACTAGAAAAAAAGAAAGTAGGAAATTTACTAATTGGAGATTTTCTAAAGAAAAAAGTGAAAAGT
TTAGAAGATATGAGTGTATTTCCAAAAGAAACTTTAGAGACAGCTGCTACAAAAATGTTAGATCCCGGTAAGGACTTTAC
CCTTCCTTCTATAAAAATAAAAGGAAGGGAAGTAATTACAAACGGATTAGCTTTATTTAACAATGATAAATTAACTGGAC
ATTTACCTTTGAAACAATCTGTTTTATTCGTGTTATTAACCGGAAAAATGGGAACAAGTGCCCGTATAACTCAAAAACTT
ACTAGCGATGAATCCGAGAAGACATCTGACTATTTAACAATGGAAGTGAGCAATCGGAAATTAAAACGAGATTTAAAAAT
AACAACAGATAAAAAAGGAAATGTTTATGCTCATATTAAGCTTCAGTTAAAAGTTATAGCGCTTGAAGCTCCAAGAGATA
ACCTTTATAAAATGGATGAAAGAAAAAAGCTAAATAAAGAATTATCGAAGCAACTTACAAAAGAAGCGAAAAAAATAACA
AATAAACTACAAAAAGCAAATTGTGATGCTTTTGGGATTGGTAGACACCTTATCGCGTATCACCCTGATTTATGGAAGAA
AAAAAAGTGGAATAAAGATTATGCAAAAGTAAAGTTTAAACCAGAAGTAGACGTAAATATTTTGTATAGTGGTGTCTTAA
AATAA

Upstream 100 bases:

>100_bases
ATTGCAACTTTCACTGATAAGTTCACCTATATTTTCATCGTTGTCCTCCCTCTTTTATTTCTACTTTATTCAGTAATAAG
AAATAAGAAAGGAGAACAGT

Downstream 100 bases:

>100_bases
AAGGTTGTATGCCACGCAGGCATACAACCTTTTATTTCGTATATCGATATACAATTGATTCGTATGGTCTTAAGTTAAGT
TTTGCAATATCCTTGCTGGA

Product: spore germination protein GerKC

Products: NA

Alternate protein names: Spore Germination Protein; Spore Germination Protein KC; Spore Germination B3 GerAC Family Protein; Spore Germination Protein GerKC; Spore Germination Protein GerHC; GerKC1 Protein; Spore Germination Protein QC; Spore Germination Gerac

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQASFENEIHSATGHNIRDTSD
ALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDPTNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKS
LEDMSVFPKETLETAATKMLDPGKDFTLPSIKIKGREVITNGLALFNNDKLTGHLPLKQSVLFVLLTGKMGTSARITQKL
TSDESEKTSDYLTMEVSNRKLKRDLKITTDKKGNVYAHIKLQLKVIALEAPRDNLYKMDERKKLNKELSKQLTKEAKKIT
NKLQKANCDAFGIGRHLIAYHPDLWKKKKWNKDYAKVKFKPEVDVNILYSGVLK

Sequences:

>Translated_374_residues
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQASFENEIHSATGHNIRDTSD
ALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDPTNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKS
LEDMSVFPKETLETAATKMLDPGKDFTLPSIKIKGREVITNGLALFNNDKLTGHLPLKQSVLFVLLTGKMGTSARITQKL
TSDESEKTSDYLTMEVSNRKLKRDLKITTDKKGNVYAHIKLQLKVIALEAPRDNLYKMDERKKLNKELSKQLTKEAKKIT
NKLQKANCDAFGIGRHLIAYHPDLWKKKKWNKDYAKVKFKPEVDVNILYSGVLK
>Mature_374_residues
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQASFENEIHSATGHNIRDTSD
ALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDPTNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKS
LEDMSVFPKETLETAATKMLDPGKDFTLPSIKIKGREVITNGLALFNNDKLTGHLPLKQSVLFVLLTGKMGTSARITQKL
TSDESEKTSDYLTMEVSNRKLKRDLKITTDKKGNVYAHIKLQLKVIALEAPRDNLYKMDERKKLNKELSKQLTKEAKKIT
NKLQKANCDAFGIGRHLIAYHPDLWKKKKWNKDYAKVKFKPEVDVNILYSGVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42281; Mature: 42281

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQ
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
ASFENEIHSATGHNIRDTSDALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDP
CHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEECCCC
TNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKSLEDMSVFPKETLETAATKML
CCHHHEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
DPGKDFTLPSIKIKGREVITNGLALFNNDKLTGHLPLKQSVLFVLLTGKMGTSARITQKL
CCCCCCCCCEEEECCHHHHHCCEEEECCCCEEEECCHHHCEEEEEEECCCCCCHHHHHHH
TSDESEKTSDYLTMEVSNRKLKRDLKITTDKKGNVYAHIKLQLKVIALEAPRDNLYKMDE
HCCCCCCCCCEEEEEECCCHHHCCCEEEECCCCCEEEEEEEEEEEEEEECCCCCHHHHHH
RKKLNKELSKQLTKEAKKITNKLQKANCDAFGIGRHLIAYHPDLWKKKKWNKDYAKVKFK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHEEECCCHHHHCCCCCCHHEEEEC
PEVDVNILYSGVLK
CCCCEEEEECCCCC
>Mature Secondary Structure
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQ
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
ASFENEIHSATGHNIRDTSDALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDP
CHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEECCCC
TNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKSLEDMSVFPKETLETAATKML
CCHHHEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
DPGKDFTLPSIKIKGREVITNGLALFNNDKLTGHLPLKQSVLFVLLTGKMGTSARITQKL
CCCCCCCCCEEEECCHHHHHCCEEEECCCCEEEECCHHHCEEEEEEECCCCCCHHHHHHH
TSDESEKTSDYLTMEVSNRKLKRDLKITTDKKGNVYAHIKLQLKVIALEAPRDNLYKMDE
HCCCCCCCCCEEEEEECCCHHHCCCEEEECCCCCEEEEEEEEEEEEEEECCCCCHHHHHH
RKKLNKELSKQLTKEAKKITNKLQKANCDAFGIGRHLIAYHPDLWKKKKWNKDYAKVKFK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHEEECCCHHHHCCCCCCHHEEEEC
PEVDVNILYSGVLK
CCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA