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The map label for this gene is yvsH [H]

Identifier: 30260783

GI number: 30260783

Start: 644171

End: 645568

Strand: Reverse

Name: yvsH [H]

Synonym: BA_0629

Alternate gene names: 30260783

Gene position: 645568-644171 (Counterclockwise)

Preceding gene: 30260787

Following gene: 30260779

Centisome position: 12.35

GC content: 36.62

Gene sequence:

>1398_bases
ATGGAAACGAAAAAATGGGGATTATGGGTTTTAACAGCTTTTGTTATCGGGAATATGGTTGGCGGTGGCGTATTTATGCT
CCCAGCAAATTTAGCACAAGTATCAGGTCCAATGGGTTCTACACTTGCATGGAGTATTACAGGCCTTGGCGTATTTATGA
TTGCACTCGTATTTGGAAATTTGGCAATCCGAAAGCCAGAATTAAAAGCAGGGCCACAAAGCTATGCTCAAGCAATGTTC
CCTTCAAAAAAGGCGGGTAAAGTTGCAGGGTATAGTATGGCATGGGGATATTGGGCAGCGAACTGGGCTGCAACAGCATC
TGTTATTATTTCCTTTGCTGGATATTTATCAACATTCTTTCCAGTTTTACAAAGTAAGCAAATTCTCTTTTCAACGAACG
GATTTTCACTAGAACTCGGAAAAGGATTAACTTTCCTCGTATGTAGCCTTATGCTATGGGGAATTCAATATATTCTTTCT
CAAAATATTGATCGAGCTGGCAATATGAATCTTCTTGCTACTATTGCAAAAATTATTGGATTTACAATGTTTATTGTAAT
CACATTATTCATTTTCAACGCCTCAAATTTTGGAGACGGTCAAACATTTATGAATGAAGCGGGACAATCCATTTCGTTAG
GTGGACAAATCAATTCAGCTGCTATTGCAACACTTTGGGCATTTATCGGTATCGAATCTGCTGTCATGCTTTCTAACCGT
GCGAAATCTCAGCGTGATGTTAAAAAAGCGACTATTTTCGGATTAATTATCGCTCTTCTTATTTACATGTCAATTACTCT
ACTTACAATGGGAGCTCTCTCTCAAGATGCTTTAAAAGACTCTCAAAAACCGTTAGTAGACGCATTAAATTTAGCAATTG
GCAATAAAGGCGCATATATAATGGCTTTACTTGCACTTGTATCTTTATTTGGATCTACAGTTGACTGGATTGTTGTTAGT
TCAGAGGTTCCTTATCAGGCAGCAAAAAATGGGCTTTTCCCTAAATTTTTCGCGAAAACAAATAAAAAAGGTAGTCCTTC
AAAATCATTATTTATTACAAATGTGATGACGCAAATTTTCTTATTCTCAACGATTTCTGGTACTGTATCAGAAGCTTATA
ATTTCGCTATCGTTGTAGCAACATTAGCTTATTTAATTCCATACCTTGTTTCTACGCTGTACCAATTCAAATTAGTTATT
ACAGGAGAAACGTATGATATACTGCCCGGTTCTCGAATAAAGGACGGGATCATTACGACATTAGCATTTGTATACTCTAT
TTGGGTTATCAAAACGGGAACTGCTGATTTAAAAACGTTCTTCTTAGGAATCGGATTGTTCGTATTAGGCCTTATTCTTT
ATCCTGTACTAATGAAAGACTCACAAAAAATGAATTAA

Upstream 100 bases:

>100_bases
CCATGTAGGTATTTTTTATCTACATGGCTCTTTTTTTATTGCCAAAAAGCTAGTAAAAAATGATGTTTAAGCAAATCTTA
CTACAAAGGAGTTAACAAAA

Downstream 100 bases:

>100_bases
AAAAGAGAAGCTTCTGGCTTCTCTTTTTTATTAGAAGTCTATAATTAACTTTTCCTTTAACTCTGCTACAGATAAAGGTT
TTGCATAATAAAATCCTTGT

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALSQDALKDSQKPLVDALNLAIGNKGAYIMALLALVSLFGSTVDWIVVS
SEVPYQAAKNGLFPKFFAKTNKKGSPSKSLFITNVMTQIFLFSTISGTVSEAYNFAIVVATLAYLIPYLVSTLYQFKLVI
TGETYDILPGSRIKDGIITTLAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN

Sequences:

>Translated_465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALSQDALKDSQKPLVDALNLAIGNKGAYIMALLALVSLFGSTVDWIVVS
SEVPYQAAKNGLFPKFFAKTNKKGSPSKSLFITNVMTQIFLFSTISGTVSEAYNFAIVVATLAYLIPYLVSTLYQFKLVI
TGETYDILPGSRIKDGIITTLAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN
>Mature_465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALSQDALKDSQKPLVDALNLAIGNKGAYIMALLALVSLFGSTVDWIVVS
SEVPYQAAKNGLFPKFFAKTNKKGSPSKSLFITNVMTQIFLFSTISGTVSEAYNFAIVVATLAYLIPYLVSTLYQFKLVI
TGETYDILPGSRIKDGIITTLAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=468, Percent_Identity=30.3418803418803, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI2367353, Length=443, Percent_Identity=30.2483069977427, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1790575, Length=398, Percent_Identity=25.3768844221106, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1786908, Length=418, Percent_Identity=25.3588516746411, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87082250, Length=471, Percent_Identity=24.8407643312102, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71995388, Length=478, Percent_Identity=23.6401673640167, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71995382, Length=478, Percent_Identity=23.6401673640167, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50251; Mature: 50251

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGN
CCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
LAIRKPELKAGPQSYAQAMFPSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFF
HHEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILSQNIDRAGNMNLLATIAKIIG
HHHCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALSQDALKDSQKPLVDALNLAIGNKGAYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCHHH
MALLALVSLFGSTVDWIVVSSEVPYQAAKNGLFPKFFAKTNKKGSPSKSLFITNVMTQIF
HHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
LFSTISGTVSEAYNFAIVVATLAYLIPYLVSTLYQFKLVITGETYDILPGSRIKDGIITT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHH
LAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGN
CCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
LAIRKPELKAGPQSYAQAMFPSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFF
HHEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILSQNIDRAGNMNLLATIAKIIG
HHHCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALSQDALKDSQKPLVDALNLAIGNKGAYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCHHH
MALLALVSLFGSTVDWIVVSSEVPYQAAKNGLFPKFFAKTNKKGSPSKSLFITNVMTQIF
HHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
LFSTISGTVSEAYNFAIVVATLAYLIPYLVSTLYQFKLVITGETYDILPGSRIKDGIITT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHH
LAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]