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The map label for this gene is yhfW

Identifier: 30065336

GI number: 30065336

Start: 4293664

End: 4294890

Strand: Direct

Name: yhfW

Synonym: S4364

Alternate gene names: 30065336

Gene position: 4293664-4294890 (Clockwise)

Preceding gene: 30065335

Following gene: 30065337

Centisome position: 93.35

GC content: 54.2

Gene sequence:

>1227_bases
ATGGCGCGATTTGTGGTGTTAGTGATTGATAGCTTTGGCGTAGGGGCAATGAAAGATGTCACGCTGGTGCGCCCGCAAGA
TGCCGGGGCGAATACCTGTGGTCACATCCTGAGCCAGTTGCCGCATTTGCAGCTACCAACGCTGGAGAAGCTGGGGCTAA
TCAACACATTGGGTTATGCGCCAGGCGATATGCAGCCGTCAGATTCCGCAACCTGGGGCGTGGCAGAGCTGCAACATGAA
GGTGGCGATACCTTTATGGGGCATCAGGAAATTTTAGGCACGCGCCCGTTACCGCCGCTGCGGATGCCTTTTCGCGATGT
GATTGACCGTGTTGAGCAGGCATTAGTTTCCGCTGGCTGGCAGGTGGAGCGCCGTGGCGATGATCTGCAATTTCTGTCGG
TCAATCAGGCGGTTGCGATTGGCGATAATCTCGAGGCGGATTTAGGCCAAGTCTATAACATTACCGCCAATCTCTCTGTG
ATCTCTTTTGACGACGCAATCAAAATTGGTCGTATCGTGCGTGACCAGGTACAGGTCGGTCGGGTCATTACATTTGGCGG
CCTGTTAACCAACAGTCAGCGTATTCTCGATGCCGCAGAAAGCAAAGAAGGGCGCTTTATTGGTATTAATGCGCCGCGTT
CTGGCGCTTATGACAACGGCTTCCAGGTCGTGCATATGGGCTACGGTGTTGATGAAAAAGTGCAGGTGCCGCAAAAACTG
TATGAAGCGGGCGTGCCAACCGTGCTGGTGGGTAAGGTGGCAGATATCGTCAGCAATCCTTATGGTGTGAGCTGGCAAAA
CCTGGTGGATAGCCAGCGGATTATGGATATCACCCTCGACGAATTTAACACCCATCCGACGGCGTTTATTTGCATCAATA
TCCAGGAAACCGACCTCGCTGGTCATGCAGAAGACGTCGCACGTTATGCCGAACGTTTGCAGGTCGTTGACCGTAACCTT
GCCCGGCTTGTTGAGGCGATGCAGCCAGATGATTGCCTGGTCGTGATGGCGGATCACGGTAACGATCCGACCATTGGTCA
CAGCCACCATACCCGTGAAGTGGTGCCAGTGCTGGTTTATCAGCAAGGGCTGGTCGCCACGCAGCTCGGTGTGCGCACCA
CGCTTTCTGATGTGGGAGCTACCGTGTGTGAATTTTTCCGTGCGCCACCGCCACAAAATGGTCGCTCTTTTCTTTCCTCC
CTCCGGTTTGCAGGAGACACCCTATGA

Upstream 100 bases:

>100_bases
TGTCACCCGTAGCGATGTGGTGCTGGTGTCCGGTATTCAGCGCGGCGAACCAGAAATAGTTGGTCGTTATGACAGCCTCG
GCAACCCTCTGGAGGCATAA

Downstream 100 bases:

>100_bases
GTTTTGATCCGACGGGTTACACCCTGGCCCATGAGCATCTGCATATTGATCTCTCCGGCTTTAAAAACAACGTGGACTGC
CGCCTTGATCAGTATGCGTT

Product: putative mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINTLGYAPGDMQPSDSATWGVAELQHE
GGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLSVNQAVAIGDNLEADLGQVYNITANLSV
ISFDDAIKIGRIVRDQVQVGRVITFGGLLTNSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLDEFNTHPTAFICINIQETDLAGHAEDVARYAERLQVVDRNL
ARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSS
LRFAGDTL

Sequences:

>Translated_408_residues
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINTLGYAPGDMQPSDSATWGVAELQHE
GGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLSVNQAVAIGDNLEADLGQVYNITANLSV
ISFDDAIKIGRIVRDQVQVGRVITFGGLLTNSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLDEFNTHPTAFICINIQETDLAGHAEDVARYAERLQVVDRNL
ARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSS
LRFAGDTL
>Mature_407_residues
ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINTLGYAPGDMQPSDSATWGVAELQHEG
GDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLSVNQAVAIGDNLEADLGQVYNITANLSVI
SFDDAIKIGRIVRDQVQVGRVITFGGLLTNSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLY
EAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLDEFNTHPTAFICINIQETDLAGHAEDVARYAERLQVVDRNLA
RLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSL
RFAGDTL

Specific function: Unknown

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family [H]

Homologues:

Organism=Escherichia coli, GI1789781, Length=408, Percent_Identity=97.5490196078431, Blast_Score=817, Evalue=0.0,
Organism=Escherichia coli, GI1790843, Length=437, Percent_Identity=28.8329519450801, Blast_Score=113, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme [H]

EC number: NA

Molecular weight: Translated: 44457; Mature: 44326

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINTLGYA
CCEEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHCHHHHCCCC
PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGW
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
QVERRGDDLQFLSVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVRDQVQVG
EEECCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHC
RVITFGGLLTNSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
CEEEECCEECCCHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLDEFNTHPTAFICINIQETDLA
HHCCCCEEEHHHHHHHHCCCCCCCHHHHHCCCCEEEEEHHHCCCCCCEEEEEEEECCCCC
GHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHEEE
QQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINTLGYA
CEEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHCHHHHCCCC
PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGW
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
QVERRGDDLQFLSVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVRDQVQVG
EEECCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHC
RVITFGGLLTNSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
CEEEECCEECCCHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLDEFNTHPTAFICINIQETDLA
HHCCCCEEEHHHHHHHHCCCCCCCHHHHHCCCCEEEEEHHHCCCCCCEEEEEEEECCCCC
GHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHEEE
QQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]