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The map label for this gene is yhfX

Identifier: 30065335

GI number: 30065335

Start: 4292500

End: 4293663

Strand: Direct

Name: yhfX

Synonym: S4363

Alternate gene names: 30065335

Gene position: 4292500-4293663 (Clockwise)

Preceding gene: 30065334

Following gene: 30065336

Centisome position: 93.33

GC content: 54.12

Gene sequence:

>1164_bases
ATGTTTGTAGAAGCATTGAAACGCCAGAACCCGGCGCTGATTTCCGCCGCACTAAGTTTGTGGCAGCAGGGCAAAATCGC
CCCGGACAGCTGGGTGATCGACGTGGATCAGATACTGGAAAACGGTAAGCGGCTCATTGAGACGGCGCGGCTTTACGGCA
TTGAACTGTATCTGATGACCAAGCAATTTGGTCGTAATCCGTGGCTGGCGGAAAAATTGCTGGCATTAGGCTACAGCGGC
ATTGTGGCGGTGGATTACAAAGAGGCGCGAGTCATGCGCCGCGCTGGTTTGCCAGTGGCGCATCAGGGGCATCTGGTACA
AATCCCTTGTCATCAGGTTGCTGACGCCGTTGAACAGGGCACCGACATCATCACCGTGTTTACTCTCGACAAAGCGCGGG
AAGTTTCTGCGGCAGCGGTTAAGGCCGGACGGGTCCAGCCTGTGCTGCTCAAAGTTTATAGCGACGATGATTTTCTTTAT
CCGGGGCAGGAGAGCGGTTTTGTACAGCATTCGCTGCACGAGGTGATTGCTGAAATTAAGAAACTGCCGGGGCTGCATTT
AGCCGGACTAACCCATTTCCCTTGCCTGCTTTGGGATGAGGCTGCTGGGAAAGTTTTGCCAACACCGAATCTTCACACGC
TGGTACAAGCACGGGATCAACTGGCGAAATCTGGTATTGCGATTGAGCAACTGAACGTACCTTCAGCGACCAGCTGCACT
TCGCTGCCATTGCTGGCGGAATACGGTGCGACTCATGCCGAACCCGGTCATGCGCTGACCGGTACTATTCCGGCAAACCA
GCAGGGCGATCAGCCTGAACGTATCGCGATGCTCTGGTTAAGTGAAATCTCCCATCATTTCCGTGGCGACAGCTACTGCT
ACGGCGGCGGTTACTACCGTCGTGGTCATGCGCAACATGCGCTGGTGTTTACGCCAGAAAATCAAAAGATTACTGAAACC
AATCTCAAAACTGTGGATGACAGCAGTATCGACTACACCCTGCCGCTGGCAGGCGAGTATCCGGTGAGCAGTGCAGTGGT
GCTCTGTTTTCGCACGCAGATTTTTGTCACCCGTAGCGATGTGGTGCTGGTGTCCGGTATTCAGCGCGGCGAACCAGAAA
TAGTTGGTCGTTATGACAGCCTCGGCAACCCTCTGGAGGCATAA

Upstream 100 bases:

>100_bases
CTAACGAAGAGGTTTGAAGCTCCCGACAAATCCACGTCGCACAACCTAAATATTCAAAAAAATGAATATTTAATTCAAGG
AACAGAAACGAGGCAACAAG

Downstream 100 bases:

>100_bases
ATGGCGCGATTTGTGGTGTTAGTGATTGATAGCTTTGGCGTAGGGGCAATGAAAGATGTCACGCTGGTGCGCCCGCAAGA
TGCCGGGGCGAATACCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSG
IVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDIITVFTLDKAREVSAAAVKAGRVQPVLLKVYSDDDFLY
PGQESGFVQHSLHEVIAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLVQARDQLAKSGIAIEQLNVPSATSCT
SLPLLAEYGATHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITET
NLKTVDDSSIDYTLPLAGEYPVSSAVVLCFRTQIFVTRSDVVLVSGIQRGEPEIVGRYDSLGNPLEA

Sequences:

>Translated_387_residues
MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSG
IVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDIITVFTLDKAREVSAAAVKAGRVQPVLLKVYSDDDFLY
PGQESGFVQHSLHEVIAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLVQARDQLAKSGIAIEQLNVPSATSCT
SLPLLAEYGATHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITET
NLKTVDDSSIDYTLPLAGEYPVSSAVVLCFRTQIFVTRSDVVLVSGIQRGEPEIVGRYDSLGNPLEA
>Mature_387_residues
MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSG
IVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDIITVFTLDKAREVSAAAVKAGRVQPVLLKVYSDDDFLY
PGQESGFVQHSLHEVIAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLVQARDQLAKSGIAIEQLNVPSATSCT
SLPLLAEYGATHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITET
NLKTVDDSSIDYTLPLAGEYPVSSAVVLCFRTQIFVTRSDVVLVSGIQRGEPEIVGRYDSLGNPLEA

Specific function: Unknown

COG id: COG3457

COG function: function code E; Predicted amino acid racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789782, Length=387, Percent_Identity=94.3152454780362, Blast_Score=758, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: NA

Molecular weight: Translated: 42447; Mature: 42447

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMT
CCHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEEEE
KQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQG
HHHCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCEECCCCEEEECHHHHHHHHHCC
TDIITVFTLDKAREVSAAAVKAGRVQPVLLKVYSDDDFLYPGQESGFVQHSLHEVIAEIK
CCEEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHH
KLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLVQARDQLAKSGIAIEQLNVPSATSCT
HCCCCEEECHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
SLPLLAEYGATHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYR
CCCHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEE
RGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEYPVSSAVVLCFRTQIFVTRSD
CCCCCEEEEECCCCCEEECCCCEECCCCCCEEEEECCCCCCHHHHEEEEEEEEEEEEECC
VVLVSGIQRGEPEIVGRYDSLGNPLEA
EEEEECCCCCCCCEEECHHCCCCCCCC
>Mature Secondary Structure
MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMT
CCHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEEEE
KQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQG
HHHCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCEECCCCEEEECHHHHHHHHHCC
TDIITVFTLDKAREVSAAAVKAGRVQPVLLKVYSDDDFLYPGQESGFVQHSLHEVIAEIK
CCEEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHH
KLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLVQARDQLAKSGIAIEQLNVPSATSCT
HCCCCEEECHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
SLPLLAEYGATHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYR
CCCHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEE
RGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEYPVSSAVVLCFRTQIFVTRSD
CCCCCEEEEECCCCCEEECCCCEECCCCCCEEEEECCCCCCHHHHEEEEEEEEEEEEECC
VVLVSGIQRGEPEIVGRYDSLGNPLEA
EEEEECCCCCCCCEEECHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]