Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is 30065236

Identifier: 30065236

GI number: 30065236

Start: 4172900

End: 4173415

Strand: Direct

Name: 30065236

Synonym: S4838

Alternate gene names: NA

Gene position: 4172900-4173415 (Clockwise)

Preceding gene: 30065235

Following gene: 30065237

Centisome position: 90.73

GC content: 35.66

Gene sequence:

>516_bases
ATGACGAAACTTATGCAATTTGTTCAGAGGTGCTATTATATGACTAATAAGAAAATGTATTTTATATTAATACTTGTTTT
CACATTGCTACAGGTGTGTTTTTTTGCTCTCTGGAAGGCTCGTGATGGTAGCACAACGTCTCTTGAATGTACGTCGACGT
TAACAAGAAATGCTAAAACAGATCATTCTTTATACTACTCTGCTAACCTTTCAGTCATTTTAAAAAAAGATGGTAGCGGT
AGTTTTACGATTGTTGGCTTAACTGATGAAGATACACCGAGGAAATTTTCCCATTCGTATTTTTTTACCTACAAAATAGA
TAGTAACGGACGGATCTCAGGTAATGCTAAGGCCAAAGTTTCGGGACTGGAAAATCAGATAAAGGATGAGAACTTCAGAC
TCAATTTTCTCGATGCATCTTTAACAGGTAAAGGCAATGCGAGGCTAAGCAAGTTTAATAATGTCTATATTTTTAGTATC
CCGGGGTTGATCATTAACACATGTGCTCCAATATAA

Upstream 100 bases:

>100_bases
CCCTGTGTGCCAGGTGCAAATTTTATATATGATGTAAATAGTATGCATTATTTGCTTGGGGAAGGGCAGCGGTATTTATC
AAGATGTATAAAATCCTCTA

Downstream 100 bases:

>100_bases
AATTATAATTTTATATTCTACATTATTTCACTAAGTTCGTAAAAAACCAGCGTTAAGATATGAATAACGCTGGGATTATG
TAAATTTTAATTTTTTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTKLMQFVQRCYYMTNKKMYFILILVFTLLQVCFFALWKARDGSTTSLECTSTLTRNAKTDHSLYYSANLSVILKKDGSG
SFTIVGLTDEDTPRKFSHSYFFTYKIDSNGRISGNAKAKVSGLENQIKDENFRLNFLDASLTGKGNARLSKFNNVYIFSI
PGLIINTCAPI

Sequences:

>Translated_171_residues
MTKLMQFVQRCYYMTNKKMYFILILVFTLLQVCFFALWKARDGSTTSLECTSTLTRNAKTDHSLYYSANLSVILKKDGSG
SFTIVGLTDEDTPRKFSHSYFFTYKIDSNGRISGNAKAKVSGLENQIKDENFRLNFLDASLTGKGNARLSKFNNVYIFSI
PGLIINTCAPI
>Mature_170_residues
TKLMQFVQRCYYMTNKKMYFILILVFTLLQVCFFALWKARDGSTTSLECTSTLTRNAKTDHSLYYSANLSVILKKDGSGS
FTIVGLTDEDTPRKFSHSYFFTYKIDSNGRISGNAKAKVSGLENQIKDENFRLNFLDASLTGKGNARLSKFNNVYIFSIP
GLIINTCAPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19342; Mature: 19210

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLMQFVQRCYYMTNKKMYFILILVFTLLQVCFFALWKARDGSTTSLECTSTLTRNAKT
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCC
DHSLYYSANLSVILKKDGSGSFTIVGLTDEDTPRKFSHSYFFTYKIDSNGRISGNAKAKV
CCEEEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEECCCCCEEE
SGLENQIKDENFRLNFLDASLTGKGNARLSKFNNVYIFSIPGLIINTCAPI
CCCHHHCCCCCEEEEEEEEEECCCCCCEEEECCCEEEEEECCEEECCCCCC
>Mature Secondary Structure 
TKLMQFVQRCYYMTNKKMYFILILVFTLLQVCFFALWKARDGSTTSLECTSTLTRNAKT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCC
DHSLYYSANLSVILKKDGSGSFTIVGLTDEDTPRKFSHSYFFTYKIDSNGRISGNAKAKV
CCEEEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEECCCCCEEE
SGLENQIKDENFRLNFLDASLTGKGNARLSKFNNVYIFSIPGLIINTCAPI
CCCHHHCCCCCEEEEEEEEEECCCCCCEEEECCCEEEEEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA