Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yjbE

Identifier: 30064617

GI number: 30064617

Start: 3417846

End: 3418088

Strand: Direct

Name: yjbE

Synonym: S3552

Alternate gene names: 30064617

Gene position: 3417846-3418088 (Clockwise)

Preceding gene: 30064616

Following gene: 30064618

Centisome position: 74.31

GC content: 60.49

Gene sequence:

>243_bases
ATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGG
CGAAGCGGCAGAGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGG
TGGGTGTCGCGCTCGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAG
TAA

Upstream 100 bases:

>100_bases
ATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCA
TTCAATGAAGGGAAATTGTT

Downstream 100 bases:

>100_bases
TAAAGTATGTATCCCCAAAATAATTTGAGTCATTGCATCTGTGGCTTGAAGTATGAAGGGATTTACCATAACCACACTCC
GGTGTGGTTATTCTGCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKKVLYGIFAISALAATSAWAAPVQVGEAAESAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ

Sequences:

>Translated_80_residues
MKKVLYGIFAISALAATSAWAAPVQVGEAAESAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ
>Mature_80_residues
MKKVLYGIFAISALAATSAWAAPVQVGEAAESAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790458, Length=80, Percent_Identity=98.75, Blast_Score=139, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7458; Mature: 7458

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLYGIFAISALAATSAWAAPVQVGEAAESAATSVSAGSSSATSVSTVSSAVGVALAA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEEE
TGGGDGSNTGTTTTTTTSTQ
CCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MKKVLYGIFAISALAATSAWAAPVQVGEAAESAATSVSAGSSSATSVSTVSSAVGVALAA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEEE
TGGGDGSNTGTTTTTTTSTQ
CCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]