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The map label for this gene is ygiQ [H]

Identifier: 30064369

GI number: 30064369

Start: 3143031

End: 3144272

Strand: Reverse

Name: ygiQ [H]

Synonym: S3263

Alternate gene names: 30064369

Gene position: 3144272-3143031 (Counterclockwise)

Preceding gene: 30064370

Following gene: 30064364

Centisome position: 68.36

GC content: 52.98

Gene sequence:

>1242_bases
ATGCAAAAACACGGTGACCGCTATGTGTGGATCAACCCGCCTGCTATCCCGCTTTCTACCGAAGAGATGGACAGCGTTTT
TGCGCTGCCGTACAAGCGCGTGCCACATCCGGCCTATGGCAATGCCCGTATTCCGGCTTACGAAATGATCCGTTTTTCGG
TCAACATTATGCGCGGCTGCTTTGGCGGCTGTTCTTTCTGTTCTATTACCGAGCACGAAGGGCGCATTATTCAGAGCCGT
TCGGAAGATTCGATCATTAATGAGATCGAAGCGATCCGCGACACCGTTCCAGGTTTTACGGGCGTGATTTCCGATCTCGG
TGGGCCAACTGCCAACATGTATATGTTGCGCTGCAAATCGCCACGCGCTGAACAAACTTGTCGCCGTTTGTCGTGCGTTT
ATCCGGATATTTGTCCGCACATGGACACTAACCACGAACCGACGATCAACCTCTATCGCCGTGCGCGTGATCTGAAAGGC
ATTAAAAAAATCCTTATCGCCTCAGGCGTACGTTATGACATCGCCGTGGAAGATCCGCGCTATATCAAAGAGTTGGCGAC
CCATCACGTCGGCGGTTATCTGAAGATTGCTCCGGAACATACCGAAGAAGGGCCGTTGTCGAAGATGATGAAGCCGGGCA
TGGGCAGCTATGACCGCTTTAAAGAGCTGTTCGATACCTACTCGAAACAGGCAGGTAAAGAGCAGTATCTGATCCCGTAT
TTCATCTCTGCGCACCCCGGTACGCGTGATGAAGATATGGTGAATTTGGCGCTGTGGCTGAAAAAGCATCGTTTCCGTCT
CGACCAGGTACAGAACTTCTACCCATCGCCGCTGGCGAACTCAACCACCATGTATTACACCGGGAAAAAACCGCTGGCGA
AGATTGGTTATAAGAGCGAAGGCGTCTTCGTACCGAAGGGCGACAAACAGCGTCGTTTGCATAAAGCGTTGTTGCGTTAC
CACGATCCGGCAAACTGGCCGTTAATCCGCCAGGCGCTGGAAGCGATGGGCAAAAAGCATCTGATTGGCAGCCGTCGCGA
TTGCTTAGTGCCTGCGCCAACCATTGAAGAGATGCGTGAAGCTCGTCGCCAGAACCGCAATACCCGTCCGGCGTTGACTA
AACATACGCCGATGGCGACTCAGCGTCAGACGCCTGCTACGGCAAAAAAAGCGTCGTCTACGCAATCTCGTCCGGTGAAT
GCTGGTGCGAAGAAACGCCCTAAAGCGGCGGTTGGACGTTAA

Upstream 100 bases:

>100_bases
GCTGCCTTCTTTCGAGAAAGTGAAGGGCGATAAAGTGCTGTACGCCCATGCTTCGCGCATTCTGCACCACGAAACCAACC
CAGGCTGCGCCCGCGCATTG

Downstream 100 bases:

>100_bases
AAAAAATCCCCGGCAACTGACATGCTGCCGGGGATTTTTTTATCATTCTGCGTACATACGCAAGCAGCGCAGGCAATCAA
AATAGTCCTGTGCATCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR
SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKG
IKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYKSEGVFVPKGDKQRRLHKALLRY
HDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVN
AGAKKRPKAAVGR

Sequences:

>Translated_413_residues
MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR
SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKG
IKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYKSEGVFVPKGDKQRRLHKALLRY
HDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVN
AGAKKRPKAAVGR
>Mature_413_residues
MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR
SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKG
IKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYKSEGVFVPKGDKQRRLHKALLRY
HDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVN
AGAKKRPKAAVGR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=413, Percent_Identity=99.5157384987893, Blast_Score=858, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 46900; Mature: 46900

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGC
CCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS
CCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECC
PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR
CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH
YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
HHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYKSE
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCCCCCC
GVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE
CEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHH
ARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGC
CCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS
CCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECC
PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR
CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH
YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
HHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYKSE
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCCCCCC
GVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE
CEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHH
ARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]