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The map label for this gene is yfcV [H]

Identifier: 30063758

GI number: 30063758

Start: 2442723

End: 2443286

Strand: Reverse

Name: yfcV [H]

Synonym: S2550

Alternate gene names: 30063758

Gene position: 2443286-2442723 (Counterclockwise)

Preceding gene: 30063759

Following gene: 30063756

Centisome position: 53.12

GC content: 45.92

Gene sequence:

>564_bases
ATGAGTAAGTTTGTTAAAACAGCTATTGCTGCGGCAATGGTGATGGGCGTGTTCACCTCTACGGCAACAATCGCTGCGGG
TAACAACGGTACTGCACGTTTTTACGGCACCATTGAAGACTCAGTGTGTTCTATCGTTCCGGACGATCACAAACTGGAAG
TTGATATGGGTGATATCGGTGCCGAAAAACTGAAAAATAACGGCACCACCACGCCGAAAAGTTTCCAGATTCGTCTGCAA
GATTGCGTATTTGATACTCAGGAAACAATGACCACTACCTTTACTGGTACCGTTTCTTCTGCAAATAGCGGCAATTATTA
CACCATTTTCAATACCGATACCGGTGCGGCATTTAACAATGTTAGCCTGGCGATCGGTGACTCTCTGGGTACCTCTTACA
AAAGCGGCATGGGTATTGACCAGAAAATAGTGAAAGACACTTCTACCAACAAAGGCAAAGCGAAGCAGACACTGAACTTT
AACGCCTGGCTGGTCGGCGCAGCTGATGCGCCAGATCTGGGTAATTTTGAAGCAAATACCACCTTCCAGATTACTTACCT
GTAA

Upstream 100 bases:

>100_bases
GCATGCCGTATTCAATGGCTGGGTATAAACATTGGCTATTGACTGAATCAATGTATTGCAATGTTTATATTTTTAATTAT
TTATAGTTTAAGGACAAATA

Downstream 100 bases:

>100_bases
GGCATACCCCCATAGCGACACTGCTATGGGGGATTTAAATGTATTTTGACCGAACAAGAATAAAAACGGATAGAAACGTG
TATGCCTGACCATTCTCTTT

Product: putative fimbrial-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQ
DCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNF
NAWLVGAADAPDLGNFEANTTFQITYL

Sequences:

>Translated_187_residues
MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQ
DCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNF
NAWLVGAADAPDLGNFEANTTFQITYL
>Mature_186_residues
SKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQD
CVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNFN
AWLVGAADAPDLGNFEANTTFQITYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788680, Length=187, Percent_Identity=97.8609625668449, Blast_Score=346, Evalue=5e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19854; Mature: 19723

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIG
CCHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEECCCEEEECCCCCEEEEECCCCC
AEKLKNNGTTTPKSFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNN
HHHHHCCCCCCCCEEEEEEEHHCCCCCHHEEEEEEEEECCCCCCCEEEEEECCCCCCCCC
VSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNFNAWLVGAADAPDLGNFEANT
EEEEECCCCCCCHHCCCCCCHHHHHCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCC
TFQITYL
EEEEEEC
>Mature Secondary Structure 
SKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIG
CHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEECCCEEEECCCCCEEEEECCCCC
AEKLKNNGTTTPKSFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNN
HHHHHCCCCCCCCEEEEEEEHHCCCCCHHEEEEEEEEECCCCCCCEEEEEECCCCCCCCC
VSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNFNAWLVGAADAPDLGNFEANT
EEEEECCCCCCCHHCCCCCCHHHHHCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCC
TFQITYL
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]