| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is aroC
Identifier: 30063755
GI number: 30063755
Start: 2433968
End: 2435053
Strand: Reverse
Name: aroC
Synonym: S2540
Alternate gene names: 30063755
Gene position: 2435053-2433968 (Counterclockwise)
Preceding gene: 30063756
Following gene: 30063754
Centisome position: 52.94
GC content: 56.63
Gene sequence:
>1086_bases ATGGCTGGAAACACAATTGGACAACTCTTTCGCGTAACCACCTTCGGCGAATCGCACGGGCTGGCGCTCGGCTGCATCGT CGATGGTGTTCCGCCAGGCATTCCGCTGACGGAAGCGGACCTGCAACATGACCTTGATCGTCGTCGCCCTGGGACATCGC GCTATACCACCCAGCGCCGCGAGCCGGATCAGGTCAAAATACTCTCCGGTGTTTTTGAAGGCGTTACTACTGGCACCAGC ATTGGCTTGTTGATCGAAAATACCGACCAGCGTTCTCAGGATTACAGCGCAATTAAAGACGTCTTCCGTCCAGGCCATGC TGATTACACCTACGAACAAAAATACGGTCTGCGCGATTATCGCGGCGGTGGACGTTCTTCCGCCCGCGAAACCGCCATGC GCGTGGCGGCAGGGGCGATTGCCAAAAAATATCTCGCCGAGAAATTTGGTATTGAAATCCGCGGCTGCCTGACCCAGATG GGCGACATTCCGCTGGAAATCAAAGACTGGTCGCTGGTTGAACAAAATCCGTTCTTCTGCCCGGACCCCGACAAAATCGA CGCGTTAGATGAACTGATGCGCGCGCTGAAAAAAGAGGGCGACTCCATCGGCGCGAAAGTCACCGTTGTTGCCAGTGGTG TCCCCGCCGGACTTGGCGAGCCGGTCTTTGACCGCCTGGATGCCGACATCGCCCATGCGCTGATGAGCATCAACGCGGTG AAAGGCGTGGAAATTGGCGACGGTTTTGACGTAGTGGCGCTGCGCGGCAGCCAGAACCGCGACGAAATCACCAAAGACGG TTTCCAGAGCAACCATGCGGGCGGCATTTTCGGCGGTATCAGCAGCGGGCAGCAAATCATTGCTCATATGGCGCTGAAAC CGACCTCCAGCATTACCGTGCCGGGGCGCACTATTAACCGCTTTGGCGAAGAAGTTGAGATGATCACCAAAGGCCGTCAC GATCCCTGTGTCGGGATCCGTGCAGTGCCGATCGCTGAAGCGATGCTGGCGATCGTTTTAATGGATCACCTGTTACGGCA GCGGGCGCAAAATGCCGATGTGAAGACTGATATTCCACGCTGGTAA
Upstream 100 bases:
>100_bases GTGTTTATGCTCACTAAAGAGCAGCTTATTGCCGCACGAGAACATTTCGCGATTTATAAAGATTAAGTAAACACGCAAAC ACAACAATAACGGAGCCGTG
Downstream 100 bases:
>100_bases AAAATGAACAAAACCGCGATTGCGCTGCTGGCTCTGCTTGCCAGTAGTGCTAGCCTGGCAGCGACGCCGTGGCAAAAAAT AACCCAACCTGTGCCGGGTA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTS IGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGIFGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRH DPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPRW
Sequences:
>Translated_361_residues MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTS IGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGIFGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRH DPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPRW >Mature_360_residues AGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSI GLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMG DIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAVK GVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGIFGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHD PCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPRW
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=361, Percent_Identity=99.1689750692521, Blast_Score=733, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6321290, Length=368, Percent_Identity=45.6521739130435, Blast_Score=310, Evalue=2e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 39171; Mature: 39040
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR CCCCHHHHHHEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC EPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDY CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHC RGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLEIKDWSLVEQNPFFC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCEEECCCCCCC PDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGIFGGISSGQQIIAHMALKPTSSITV CCCEECCCCEEEEECCCCCHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCEEE PGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPR CCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC W C >Mature Secondary Structure AGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR CCCHHHHHHEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC EPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDY CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHC RGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLEIKDWSLVEQNPFFC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCEEECCCCCCC PDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGIFGGISSGQQIIAHMALKPTSSITV CCCEECCCCEEEEECCCCCHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCEEE PGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPR CCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC W C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA