| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yejA
Identifier: 30063620
GI number: 30063620
Start: 2275020
End: 2276834
Strand: Direct
Name: yejA
Synonym: S2393
Alternate gene names: 30063620
Gene position: 2275020-2276834 (Clockwise)
Preceding gene: 30063619
Following gene: 30063621
Centisome position: 49.46
GC content: 50.63
Gene sequence:
>1815_bases ATGATTGTGCGCATACTGCTGCTGTTTATCGCTCTGTTCACCTTCGGTGCGCAGGCGCAGGCTATCAAGGAAAGCTATAC CTTTGCCGTGCTGGGCGAACCCCGGTACGCGTTTAATTTCAACCATTTTGATTATGTGAACCCCGCCGCGCCAAAAGGTG GGCAGATAACGTTGTCAGCCCTCGGTACCTTCGATAATTTCAACCGCTATGCACTGCGCGGCAACCCGGGCGCACGCACC GAGCAGCTGTACGACACGTTATTTACGACTTCCGATGACGAACCAGGCAGTTATTACCCGCTGATTGCTGAAAGTGCACG CTATGCTGACGATTATTCCTGGGTGGAGGTCGCTATTAATCCGCGCGCCCGTTTTCATGATGGTTCTCCCATTACTGCCC GCGATGTAGAGTTTACTTTTCAAAAATTTCTGACCGAAGGCGTGCCGCAATTTCGTCTGGTCTACAAAGGCACCACCGTC AAAGCCATTGCGCCGTTAACCGTGCGCATTGAGTTAGCTAAACCCGGCAAAGAAGATATGTTGAGTCTGTTTTCGCTGCC GGTATTTCCAGAAAAGTACTGGAAGGATCACAAACTTAGCGACCCGCTCGCCACGCCTCCGCTTGCCAGTGGTCCGTACC ACGTTACGTCCTGGAAAATGGGGCAAAATATTGTCTATTCCCGCGTGAAAGATTACTGGGCAGCAAACTTACCGGTAAAC CGTGGACGCTGGAATTTCGACACCATTCGCTACGATTATTACCTCGATGATAATGTCGCCTTTGAAGCGTTTAAAGCAGG TGCCTTTGATTTGCGTATGGAAAACGACGCTAAAAACTGGGCCACGCGTTATACCGGTAAAAATTTCGATAAAAAATACA TCATCAAAGATGAGCAAAAGAACGAATCAGCCCAGGATACGCGCTGGCTGGCGTTTAATATCCAACGTGCGGTATTCAGC GATCGCCGGGTGCGGGAAGCAATCACTCTCGCCTTTGACTTTGAATGGATGAACAAGGCGTTGTTTTACAACGCCTGGAG TCGCACGAACAGTTATTTTCAAAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCAC CAATGAAAAAAGATCTACCGCCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCTAAAGGCGATGGCTACGATCGT GACAACCTGTTAAAAGCCGACAAACTTCTCAACGAAGCGGGCTGGGTGCTGAAGGGTCAGCAACGCGTTAATGCCACAAC GGGTCAGCCGCTCAGCTTTGAATTATTGCTTCCCGCAAGCAGCAATAGTCAGTGGGTATTGCCGTTCCAGCACAGCCTGC AACGGCTGGGTATCAATATGGACATTCGCAAGGTGGATAACTCGCAAATCACTAACCGCATGCGCAATCGCGACTATGAC ATGATGCCGCGACTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTC CACTTATAATGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCACTGATCAACCAAATTATTGCCGCGCAGGGAAATAAAG AAAAATTACTGCCGTTGGGGCGAGCACTGGATCGCGTATTAACGTGGAATTATTACATGCTGCCAATGTGGTACATGGCG GAAGACCGTCTCGCCTGGTGGGATAAATTCTCCCAACCCGCTGTACGCCCTGTTTACAGCCTGGGTATCGATACCTGGTG GTATGACGTTAATAAAGCGGCCAAACTGCCGTCAGCCAGACAACAGGGAGAGTAG
Upstream 100 bases:
>100_bases GTATACGCCGCAGTGGTAAGGTGTGCTTACGTCCCTTATTATTCATAGTGAAAGCATGCCGGATTGCGGCTAATGATGAG TAAAAGGAAATCCGTTGCAG
Downstream 100 bases:
>100_bases ATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACGTTATGGGCTATTATCACTATCAACTTTTTCATCGT GCAAATTGCGCCTGGCGGTC
Product: hypothetical protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRAVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE
Sequences:
>Translated_604_residues MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRAVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE >Mature_604_residues MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRAVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae hbpA [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=604, Percent_Identity=98.1788079470199, Blast_Score=1222, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 69715; Mature: 69715
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA CHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEE LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN ECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC PRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM CCCEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN HHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCC RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQK CCCCCCEEEEEEEEECCCCEEHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCC NESAQDTRWLAFNIQRAVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA CCCCCCCEEEEEEEHHHHHHHHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHHCCCHHH RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ CCCCCHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC QRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD CEECCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCH MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG HHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSAR HHHHHHHCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHCCCCHH QQGE HCCC >Mature Secondary Structure MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA CHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEE LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN ECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC PRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM CCCEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN HHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCC RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQK CCCCCCEEEEEEEEECCCCEEHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCC NESAQDTRWLAFNIQRAVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA CCCCCCCEEEEEEEHHHHHHHHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHHCCCHHH RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ CCCCCHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC QRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD CEECCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCH MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG HHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSAR HHHHHHHCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHCCCCHH QQGE HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 9097040 [H]