| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is 30063249
Identifier: 30063249
GI number: 30063249
Start: 1852484
End: 1852690
Strand: Reverse
Name: 30063249
Synonym: S1910
Alternate gene names: NA
Gene position: 1852690-1852484 (Counterclockwise)
Preceding gene: 30063250
Following gene: 30063246
Centisome position: 40.28
GC content: 50.24
Gene sequence:
>207_bases ATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACT GGCCACACTAACGTGGGTGGACTGGTATAACAATCGACGATTGCAGGAAAGGCTGGGCCACATCCCTCCGGCAGAAGCAG AAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA
Upstream 100 bases:
>100_bases AAAGGTTCTCAGTATGTATCGCTGGCCTTGCACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAG GCGACTCGTATGACAACGCG
Downstream 100 bases:
>100_bases GTTCACAGATAAAACACTCTCCAGGAAAACCGGGGCGGTTCATTCTGGCGGGTTTTATCCACCACCTCACCCGGTTGTTT CGCCACATGAAAGCGATCGA
Product: IS629 orfB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLQERLGHIPPAEAEKAYYASIGNDDLAA
Sequences:
>Translated_68_residues MAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLQERLGHIPPAEAEKAYYASIGNDDLAA >Mature_67_residues AESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLQERLGHIPPAEAEKAYYASIGNDDLAA
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 7845; Mature: 7714
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLQERLGHIPPAEAEKAYYAS CCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEC IGNDDLAA CCCCCCCC >Mature Secondary Structure AESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLQERLGHIPPAEAEKAYYAS CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEC IGNDDLAA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2159625; 2824781 [H]