| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30062854
Identifier: 30062854
GI number: 30062854
Start: 1396190
End: 1396804
Strand: Reverse
Name: 30062854
Synonym: S1428
Alternate gene names: NA
Gene position: 1396804-1396190 (Counterclockwise)
Preceding gene: 30062855
Following gene: 30062853
Centisome position: 30.37
GC content: 54.96
Gene sequence:
>615_bases ATGCTCCCCCGTTTTGCCGATATTTTTCAGCAGGGAAACCGCTGGCTTAACTGGCTGGAGAAACAACCGGAAGGGGCAGT CCGTCCGGTGGTAATTGAATCAGTGACAAAAATCATGGCCTGCGGGACCACACTGATGGGCTACACGCAGTGGTGTTGTT CATCACCGGACTGTTGCCATACAAAAAAGGTCTGCTTCCGGTGTAAAAGCCGCTCCTGCCCGCACTGCGGGGTGAAGGCT GGCGCACAGTGGATACAGTATCTGCTGAGCCTGGTCCCCTACTGCCCGTGGCAGCATATTGTGTTCACACTTCCCTGCCA GTACTGGTCCCTGGTGTTCCACAACCGGTGGTTACTGGCAGAGATGAGCCGCATTGCAGCGGATGTGATACTGGAAATCT GCCATCAGACAGATGTGGAGCCGGGGATATTCACGGTGATCCACACATGGGGGCGTGACCAGCAGTGGCATCCGCATATC CATTTATCGACAACTGCCGGTGGTGTGACGTCGGGCCACACCTGGAAAAATCTTCATTTTTACGCCCGTAAGGTGATGAG CATGTGGCGCTACCGGATAACACGGTTGCTGTCACGGAATACCCTGACCTGGTGA
Upstream 100 bases:
>100_bases GGGAATTTGCGACCATTCTTGCCGGTATCAGCGCCGGCGGTATGTACTGCCCGGAGTGTGGCACGGTTCACTGGCCGGAC GGAGTCGCCCCGCCCTTCTG
Downstream 100 bases:
>100_bases TGCCGGATGCGCTGGCAGCAGAAGGAAGCAGTAAACGGGAATGGAATCGCTTCCTGGACACGCATTACCGCCGTGGCTGG AATGTCAACGTATCCCGGGT
Product: IS91 orf
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQTDVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRNTLTW
Sequences:
>Translated_204_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQTDVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRNTLTW >Mature_204_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQTDVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRNTLTW
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 23823; Mature: 23823
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCH CCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHEEECHHHHHHHHHCCHHHH EMSRIAADVILEICHQTDVEPGIFTVIHTWGRDQQWHPHIHLSTTAGGVTSGHTWKNLHF HHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHH YARKVMSMWRYRITRLLSRNTLTW HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCH CCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHEEECHHHHHHHHHCCHHHH EMSRIAADVILEICHQTDVEPGIFTVIHTWGRDQQWHPHIHLSTTAGGVTSGHTWKNLHF HHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHH YARKVMSMWRYRITRLLSRNTLTW HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1646375 [H]