| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30062853
Identifier: 30062853
GI number: 30062853
Start: 1395618
End: 1396190
Strand: Reverse
Name: 30062853
Synonym: S1427
Alternate gene names: NA
Gene position: 1396190-1395618 (Counterclockwise)
Preceding gene: 30062854
Following gene: 30062851
Centisome position: 30.36
GC content: 54.45
Gene sequence:
>573_bases ATGCCGGATGCGCTGGCAGCAGAAGGAAGCAGTAAACGGGAATGGAATCGCTTCCTGGACACGCATTACCGCCGTGGCTG GAATGTCAACGTATCCCGGGTAATGGATAATGCCACCCATGTGGCGGTGTACTTTGGCTCTTACCTGAAAAAGCCACCGG TGCCGATGAGTCGTCTGGAGCATTATGCCGGTCAGGATGAAATCGGTCTGCGTTACAACAGTCACCGAACAAAACGGGAA GAATACCTGTTGATGAGTGGAGATGAGTTCATGGAAAGGTTCTCCTGGCATGTGGCGGATAAGGGGTTCCGTATGGTGAG GTACTACGGTTTTTTGAGTCCGGCGAAACGGCGGTTACTGGAAGAAGTGGTGTACATCATAACGGAGACAGTGAGAAAAA CGGCGATGCAAATCACCTGGAGAGGGATGTATCAGAGGTTACTGAAGGTTGACCCGCTGAAGTGCGTGCTGTGCGGGAGT CAGATGCGTTTTACGGGGCTGAAGCGGGGCTACCGTCTGGCAGAGCAGGTCCTGATGCATGAGCCGCTGGCCCGGATGCG GTGGTGCGGCTGA
Upstream 100 bases:
>100_bases GCCACACCTGGAAAAATCTTCATTTTTACGCCCGTAAGGTGATGAGCATGTGGCGCTACCGGATAACACGGTTGCTGTCA CGGAATACCCTGACCTGGTG
Downstream 100 bases:
>100_bases GAGCCGCAGAGGGGAAGTTGCGTCCATTTTGAGGGAAACGGAGCAAAAAACCGCCATTCATACCCTGAATCAATCAGAGC CATCCAGTTTAATCGTCGGT
Product: IS91 orf
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKRE EYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGS QMRFTGLKRGYRLAEQVLMHEPLARMRWCG
Sequences:
>Translated_190_residues MPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKRE EYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGS QMRFTGLKRGYRLAEQVLMHEPLARMRWCG >Mature_189_residues PDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREE YLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQ MRFTGLKRGYRLAEQVLMHEPLARMRWCG
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 22524; Mature: 22392
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH HYAGQDEIGLRYNSHRTKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLL HHCCCCCCCCEECCCCCHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHHH EPLARMRWCG CHHHHHCCCC >Mature Secondary Structure PDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLE CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH HYAGQDEIGLRYNSHRTKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLL HHCCCCCCCCEECCCCCHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHHH EPLARMRWCG CHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1646375 [H]