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The map label for this gene is ypjA [H]

Identifier: 30062690

GI number: 30062690

Start: 1207717

End: 1207929

Strand: Direct

Name: ypjA [H]

Synonym: S1246

Alternate gene names: 30062690

Gene position: 1207717-1207929 (Clockwise)

Preceding gene: 30062687

Following gene: 30062695

Centisome position: 26.26

GC content: 50.7

Gene sequence:

>213_bases
GTGCGCAAAGAATTTGTCGATGATAATCGGGTGAAAGTGAATAGTGACGGTAATTTTGTCAATGATTTGTCGGGCAGACG
TGGAATATACCAGGCAGGTATTAAAGCCTCATTCAGCAGTACGTTAAGCGGGCATTTCGGGGTGGGGTATAGCCATGGTG
CCGGTGTGGAGTCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGA

Upstream 100 bases:

>100_bases
AGTCGATACCCGCAGTATATATCGTGAACTGGGTGCAACGCTGAGTTACAACATGCGTCTGGGGAACGGTATGGAAATTG
AACCCTGCCTGAAGGCGGCT

Downstream 100 bases:

>100_bases
CCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGAGAAAATTCTGGGGCAAAAAAAGCC
CGCCAGTTACGGCGGGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHFGVGYSHGAGVESPWNAVAGVNWSF

Sequences:

>Translated_70_residues
MRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHFGVGYSHGAGVESPWNAVAGVNWSF
>Mature_70_residues
MRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHFGVGYSHGAGVESPWNAVAGVNWSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI87082145, Length=70, Percent_Identity=94.2857142857143, Blast_Score=139, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899
- InterPro:   IPR003991 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 7552; Mature: 7552

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHFGVGYSHGAGVESPW
CCCCCCCCCCEEECCCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NAVAGVNWSF
CCCCCCCCCC
>Mature Secondary Structure
MRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHFGVGYSHGAGVESPW
CCCCCCCCCCEEECCCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NAVAGVNWSF
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]