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The map label for this gene is cspG

Identifier: 30062528

GI number: 30062528

Start: 1043340

End: 1043540

Strand: Direct

Name: cspG

Synonym: S1060

Alternate gene names: 30062528

Gene position: 1043340-1043540 (Clockwise)

Preceding gene: 30062527

Following gene: 30062529

Centisome position: 22.68

GC content: 45.77

Gene sequence:

>201_bases
ATGACTGGTTTAGTAAAATGGTTTAACGCAGATAAAGGTTTTGGCTTTATCACTCCTGATGATGGCAGCAAAGACGTTTT
CGTCCATTTCACCGCCATCCAGAGCAATGAATTCCGCACGCTGAACGAAAATCAGAAAGTTGAATTTTCTATTGAGCAGG
GGCAACGTGGCCCCGCGGCAGCGAACGTTGTTACGCTCTAA

Upstream 100 bases:

>100_bases
GTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAG
TTGGAGTCATTACCAATAAA

Downstream 100 bases:

>100_bases
GGTTGCCGTTATTACTCAACATCTCCATTTCCGCTGTCCATGTTGTCATGGTTCACAGTACCGTACATCGGCATTCGATG
TGACGGAGCGAAACCCTTTG

Product: cold shock protein CspG

Products: NA

Alternate protein names: CPS-G

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVTL

Sequences:

>Translated_66_residues
MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVTL
>Mature_65_residues
TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVTL

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain

Homologues:

Organism=Escherichia coli, GI2367114, Length=66, Percent_Identity=100, Blast_Score=137, Evalue=1e-34,
Organism=Escherichia coli, GI1787834, Length=66, Percent_Identity=77.2727272727273, Blast_Score=110, Evalue=1e-26,
Organism=Escherichia coli, GI1789979, Length=66, Percent_Identity=72.7272727272727, Blast_Score=109, Evalue=3e-26,
Organism=Escherichia coli, GI1787839, Length=64, Percent_Identity=78.125, Blast_Score=107, Evalue=1e-25,
Organism=Escherichia coli, GI1786841, Length=66, Percent_Identity=68.1818181818182, Blast_Score=99, Evalue=5e-23,
Organism=Escherichia coli, GI1788126, Length=66, Percent_Identity=68.1818181818182, Blast_Score=97, Evalue=2e-22,
Organism=Escherichia coli, GI1787107, Length=64, Percent_Identity=46.875, Blast_Score=72, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24658520, Length=63, Percent_Identity=47.6190476190476, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSPG_ECO57 (P0A980)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A90772
- RefSeq:   NP_286926.1
- RefSeq:   NP_309172.1
- ProteinModelPortal:   P0A980
- SMR:   P0A980
- MINT:   MINT-1247746
- PRIDE:   P0A980
- EnsemblBacteria:   EBESCT00000025229
- EnsemblBacteria:   EBESCT00000060458
- GeneID:   912577
- GeneID:   959053
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1406
- KEGG:   ecs:ECs1145
- GeneTree:   EBGT00050000010462
- HOGENOM:   HBG717773
- OMA:   ASESVHI
- ProtClustDB:   PRK09890
- BioCyc:   ECOL83334:ECS1145-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027
- Gene3D:   G3DSA:2.40.50.140
- PIRSF:   PIRSF002599
- PRINTS:   PR00050
- SMART:   SM00357

Pfam domain/function: PF00313 CSD; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 7320; Mature: 7189

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00352 COLD_SHOCK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA
CCCEEEEECCCCCCEEEECCCCCCEEEEEEEEEECCCCEECCCCCEEEEEECCCCCCCCC
ANVVTL
EEEEEC
>Mature Secondary Structure 
TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA
CCEEEEECCCCCCEEEECCCCCCEEEEEEEEEECCCCEECCCCCEEEEEECCCCCCCCC
ANVVTL
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796