Click here to switch to the map view.

The map label for this gene is ycbW

Identifier: 30062483

GI number: 30062483

Start: 996948

End: 997526

Strand: Direct

Name: ycbW

Synonym: S1012

Alternate gene names: 30062483

Gene position: 996948-997526 (Clockwise)

Preceding gene: 30062482

Following gene: 30062485

Centisome position: 21.68

GC content: 49.57

Gene sequence:

>579_bases
GTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGATGCGAATTAAACCAGACGATAACTGGCGTTGGTATTACGATGA
AGAGCACGATCGAATGATGCTCGATTTAGCCAATGGTATGCTATTTCGCTCACGTTTTGCGCGCAAAATGTTGACTCCAG
ATGCCTTTTCTCCCGCAGGCTTTTGTGTTGATGATGCCGCGCTCTATTTCTCTTTTGAAGAAAAGTGCCGCGATTTTAAT
TTATCTAAAGACCAAAAAGCCGAACTGGTGCTGAATGCACTGGTAGCAATTCGTTATCTCAAACCGCAAATGCCGAAAAG
CTGGCATTTTGTCTCCCATGGTGAAATGTGGGTGCCCATGCCGGGCGATGCGGCCTGCGTTTGGTTGAGCGATACTCACG
AGCAGGTCAATTTGCTGGTCGTTGAATCTGGCGAAAATGCCGCGCTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCG
GGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTGAATGTTGACAGCTTCAG
CCTCGAACAGGCAGTCTAA

Upstream 100 bases:

>100_bases
CTTTATTTTCAGACCTGGTTGTTTTATATTCATCGTTGTTGCTTATTTAGACATTTTGTACTTTTATTGTTGAGGTTATT
AAGCGAAGCGACAATGGATT

Downstream 100 bases:

>100_bases
CGCGTCAGCTTAAGGGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAG
CGGCGTGACTTCGCCTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLLRFYRVGERQMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFN
LSKDQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIA
GRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV

Sequences:

>Translated_192_residues
MLLRFYRVGERQMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFN
LSKDQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIA
GRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV
>Mature_192_residues
MLLRFYRVGERQMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFN
LSKDQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIA
GRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=180, Percent_Identity=99.4444444444444, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 22125; Mature: 22125

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRFYRVGERQMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAG
CEEEEEECCCEEEEECCCCCEEEEEECCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCC
FCVDDAALYFSFEEKCRDFNLSKDQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPM
CEEECCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEC
PGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQ
CCCEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCEEEECCCHHHCHHHHHHHHCCCCE
VNVDSFSLEQAV
ECCCCCCHHHCC
>Mature Secondary Structure
MLLRFYRVGERQMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAG
CEEEEEECCCEEEEECCCCCEEEEEECCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCC
FCVDDAALYFSFEEKCRDFNLSKDQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPM
CEEECCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEC
PGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQ
CCCEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCEEEECCCHHHCHHHHHHHHCCCCE
VNVDSFSLEQAV
ECCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]