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The map label for this gene is ybhJ

Identifier: 30062418

GI number: 30062418

Start: 921273

End: 923453

Strand: Direct

Name: ybhJ

Synonym: S0939

Alternate gene names: 30062418

Gene position: 921273-923453 (Clockwise)

Preceding gene: 30062417

Following gene: 30062423

Centisome position: 20.03

GC content: 51.4

Gene sequence:

>2181_bases
ATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAAT
TAAAAAAGAAGAAGCAAAAAAAGGCACTATTGCCTGGTCTATTCTCTCTTCTCATAATACGTCCGGAAATATGGATAAAC
TTAAAATTAAGTTTGATTCATTAGCCTCTCACGATATTACCTTTGTTGGTATTGTACAGACCGCTAAAGCGTCCGGAATG
GAACGTTTCCCGCTGCCGTATGTGCTGACCAACTGCCATAACTCACTCTGCGCCGTCGGCGGCACCATTAACGGTGATGA
CCATGTTTTTGGTTTATCGGCAGCTCAGCGTTATGGCGGTATTTTTGTGCCTCCGCATATTGCGGTCATCCATCAATATA
TGCGTGAGATGATGGCTGGCGGGGGCAAAATGATCCTCGGGTCAGACAGCCACACCCGTTACGGTGCATTAGGGACAATG
GCAGTCGGTGAGGGTGGCGGTGAGTTGGTAAAACAGCTGCTTAATGACACCTGGGATATCGACTATCCGGGCGTGGTTGC
GGTGCATCTGACCGGAAAACCTGCGCCGTATGTGGGGCCACAGGATGTGGCGCTGGCTATCATTGGCGCGGTGTTCAAAA
ACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTT
GACGTGATGACCACGGAAACCACCTGTTTAAGCTCCGTCTGGCAAACTGATGAAGAAGTGCATAACTGGCTGGCGCTGCA
CGGTCGCGGTCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCG
CCATCAAACCAATGATTGCGCTGCCGTTCCACCCGAGCAACGTGTATGAAATCGACACACTGAACCAGAACCTGACCGAC
ATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAA
TGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATG
CACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCGGTTTACCCGTCATCACAGCCGGTGTTTATGGATCTC
GCCAAAAAAGGTGTGGTAGCAGATTTGATTGGCGCAGGCGCAATCATCAGAACCGCATTCTGTGGCCCATGCTTTGGCGC
GGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAG
CCAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTGGCTATTTAACC
TCTGCCAGCGAACTTGATTGCTGGGACAACGTGCCGGAGTACGCCTTCGATGTAACGCCGTATAAAAACCGTGTTTATCA
GGGCTTTGTGAAAGGGGCAACTCAGCAACCGCTGATTTACGGACCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGA
CTGACAATATCGTCCTGAAAGTGTGCTCGAAGATCCTCGACGAAGTCACCACCACCGACGAACTGATTCCTTCCGGTGAA
ACCTCTTCTTATCGTTCAAATCCGATTGGTCTGGCGGGGAATGTCAGCGAGCTGACAGAGGTGTTTGCGCGCATTAAGCA
GATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTT
CTGCGCGTGAACAGGCGGCGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGC
TACCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAGATGGCGGAAGTGCCAACCTTTGAAGTGGGGGATTACAT
TTACATCCCTGGCATTAAAGCGGCGCTGGATAATCCGGGTACGACGTTTAAAGGTTATGTGATCCATGAAGATGCGCCGG
TAACGGAAATTACGCTTTACATGGAAAGCCTGACGGCTGAAGAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTC
AATAAAAACCGTCAGATGTAA

Upstream 100 bases:

>100_bases
TTCACTCACTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGC
GCAGATATCTGGAGCATTTG

Downstream 100 bases:

>100_bases
AAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTGGCGCATCTTATCCGACCTACAAATC
GCATCGAACCGTAGGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 726; Mature: 726

Protein sequence:

>726_residues
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKR
YRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINF
NKNRQM

Sequences:

>Translated_726_residues
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKR
YRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINF
NKNRQM
>Mature_726_residues
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKR
YRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINF
NKNRQM

Specific function: Unknown

COG id: COG1048

COG function: function code C; Aconitase A

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aconitase/IPM isomerase family [H]

Homologues:

Organism=Homo sapiens, GI4501867, Length=734, Percent_Identity=24.7956403269755, Blast_Score=140, Evalue=4e-33,
Organism=Homo sapiens, GI8659555, Length=401, Percent_Identity=23.1920199501247, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI87081781, Length=753, Percent_Identity=96.4143426294821, Blast_Score=1494, Evalue=0.0,
Organism=Caenorhabditis elegans, GI25149337, Length=731, Percent_Identity=23.9398084815322, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI32564738, Length=704, Percent_Identity=23.7215909090909, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI25149342, Length=598, Percent_Identity=23.2441471571906, Blast_Score=96, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6323335, Length=727, Percent_Identity=23.5213204951857, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6322261, Length=739, Percent_Identity=23.680649526387, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6320440, Length=405, Percent_Identity=25.1851851851852, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321429, Length=333, Percent_Identity=24.9249249249249, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28571643, Length=674, Percent_Identity=24.7774480712166, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281365315, Length=694, Percent_Identity=22.9106628242075, Blast_Score=107, Evalue=4e-23,
Organism=Drosophila melanogaster, GI17864292, Length=694, Percent_Identity=22.9106628242075, Blast_Score=107, Evalue=4e-23,
Organism=Drosophila melanogaster, GI161076999, Length=646, Percent_Identity=22.9102167182663, Blast_Score=102, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015931
- InterPro:   IPR015937
- InterPro:   IPR001030
- InterPro:   IPR015928
- InterPro:   IPR015932
- InterPro:   IPR015935
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00330 Aconitase; PF00694 Aconitase_C [H]

EC number: NA

Molecular weight: Translated: 78428; Mature: 78428

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS
CEEECCCCEEEECCCCEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECC
LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG
CCCCCEEEEEEEEHHHHCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEECHHHHHCCC
IFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI
EECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC
DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIA
EEEEECHHHHHHHHCCHHHHHHEEEECCCCCCCEEECCCCCEEECCEEEEEHHHCCCEEE
LPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC
ECCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCEEEECCEEEEC
SGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHCCHHHHHHH
CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHEECCCCCEEC
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLK
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHCCHHHHHHHH
VCSKILDEVTTTDELIPSGETSSYRSNPIGLAGNVSELTEVFARIKQIAGQEHIDPLQTE
HHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
IGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPT
HCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHCCCC
FEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINF
EECCCEEEECCCHHHCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCEEEC
NKNRQM
CCCCCC
>Mature Secondary Structure
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS
CEEECCCCEEEECCCCEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECC
LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG
CCCCCEEEEEEEEHHHHCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEECHHHHHCCC
IFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI
EECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC
DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIA
EEEEECHHHHHHHHCCHHHHHHEEEECCCCCCCEEECCCCCEEECCEEEEEHHHCCCEEE
LPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC
ECCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCEEEECCEEEEC
SGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHCCHHHHHHH
CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHEECCCCCEEC
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLK
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHCCHHHHHHHH
VCSKILDEVTTTDELIPSGETSSYRSNPIGLAGNVSELTEVFARIKQIAGQEHIDPLQTE
HHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
IGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPT
HCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHCCCC
FEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINF
EECCCEEEECCCHHHCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCEEEC
NKNRQM
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]