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The map label for this gene is rhs-like

Identifier: 30061837

GI number: 30061837

Start: 288096

End: 289085

Strand: Direct

Name: rhs-like

Synonym: S0289

Alternate gene names: 30061837

Gene position: 288096-289085 (Clockwise)

Preceding gene: 30061836

Following gene: 30061839

Centisome position: 6.26

GC content: 56.36

Gene sequence:

>990_bases
GTGACGGCGCGGGACTATATCTGGAACGCAGACGGTGAAGTCGGCGGCATCAATGACAAACTGCGCGGTTGCCTGGTGTT
CAGCTATGACCGCAGCGGCTGGCTGACCAGCCGCACGGGGCAGATGTATGACCATGACCATTATTATTACGACAAAGCGG
GCAACCTGCTGACGGATGAGTATCAGGGAGCGGTGATGGATAACCGCCTGCCGGGTTACGGGCGTGACCGCTACCGCTAT
AACGAATGGGGCGAACTGACAGAGCGCAGGGACCAGCAGCTGGAGTGGAACGCGCAGGGCCAGTTAACGCGGGTCATCAG
CAGCAACAGCGAGACGCGGTATCAGTACGATGCGCTGGGCAGGCGCATCAGCAAGGCGACCAGCAATCTCCATACCGACC
GGGGAGAACGAAGCCGGACAACGTTTGTGTGGGAAGGGTTCCGGCTGTTACAGGAGACAACGTGGCAGGGAAAGCGGACA
TACCTGTACGATGCGGAACAGCCGTACACGCCGGTGGCTGCCATCACGGGGCGCGGAGAGAGCCAGAAAATCTGGTATTA
CCACACGGACCTGACGGGCACGGTACACGAGGTAACCGCGCCGGACGGGACGCTGGTGTGGGCGGGCTACCAGGCGGGAT
TTGGTGAAAACCGGGGCGACATCAGCAACAGCGGGGCGTACTTTGAGCAGCCGCAGCGGCTGCCGGGGCAGTACTTTGAC
GAAGAAACAGGGCTGCATTACAATCTGTTCAGGTATTATGCGCCGGAGTGCGGGAGGTTCGTAAGCCAGGACCCGATAGG
ATTAAACGGTGGGTTGAACTTATATGCTTATGCGCCTAATCCGTTAGGTTGGATCGATCCGCTAGGACTGAATTCTTTAG
GAATAGATTCAAATAATATATTTAGAGGAGATGGTAACTATAAAGGTGGCGGAATTGGACAGCCAAAGAGTGGCACAATA
TCAGCACAGGACATTATTGATCATCTCTAA

Upstream 100 bases:

>100_bases
GCGGCTACAACGCCGACAACCGGTTAAGCTGGCAGCGCAGCCTGCCAGGTGGCAGCCAGAATCCACAGCAGGCGGTACTC
CCCCGGCGCAGAACGACAGC

Downstream 100 bases:

>100_bases
GAAAAAGGTGATGGGCGTTTAACATCTTTTAGTACTAAAAAAACATCTAGTTCCAACTCTCGTGGTGCAGATTTTTTCTC
AAAAAACCATGTCTTCAAAG

Product: putative Rhs-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTARDYIWNADGEVGGINDKLRGCLVFSYDRSGWLTSRTGQMYDHDHYYYDKAGNLLTDEYQGAVMDNRLPGYGRDRYRY
NEWGELTERRDQQLEWNAQGQLTRVISSNSETRYQYDALGRRISKATSNLHTDRGERSRTTFVWEGFRLLQETTWQGKRT
YLYDAEQPYTPVAAITGRGESQKIWYYHTDLTGTVHEVTAPDGTLVWAGYQAGFGENRGDISNSGAYFEQPQRLPGQYFD
EETGLHYNLFRYYAPECGRFVSQDPIGLNGGLNLYAYAPNPLGWIDPLGLNSLGIDSNNIFRGDGNYKGGGIGQPKSGTI
SAQDIIDHL

Sequences:

>Translated_329_residues
MTARDYIWNADGEVGGINDKLRGCLVFSYDRSGWLTSRTGQMYDHDHYYYDKAGNLLTDEYQGAVMDNRLPGYGRDRYRY
NEWGELTERRDQQLEWNAQGQLTRVISSNSETRYQYDALGRRISKATSNLHTDRGERSRTTFVWEGFRLLQETTWQGKRT
YLYDAEQPYTPVAAITGRGESQKIWYYHTDLTGTVHEVTAPDGTLVWAGYQAGFGENRGDISNSGAYFEQPQRLPGQYFD
EETGLHYNLFRYYAPECGRFVSQDPIGLNGGLNLYAYAPNPLGWIDPLGLNSLGIDSNNIFRGDGNYKGGGIGQPKSGTI
SAQDIIDHL
>Mature_328_residues
TARDYIWNADGEVGGINDKLRGCLVFSYDRSGWLTSRTGQMYDHDHYYYDKAGNLLTDEYQGAVMDNRLPGYGRDRYRYN
EWGELTERRDQQLEWNAQGQLTRVISSNSETRYQYDALGRRISKATSNLHTDRGERSRTTFVWEGFRLLQETTWQGKRTY
LYDAEQPYTPVAAITGRGESQKIWYYHTDLTGTVHEVTAPDGTLVWAGYQAGFGENRGDISNSGAYFEQPQRLPGQYFDE
ETGLHYNLFRYYAPECGRFVSQDPIGLNGGLNLYAYAPNPLGWIDPLGLNSLGIDSNNIFRGDGNYKGGGIGQPKSGTIS
AQDIIDHL

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786706, Length=126, Percent_Identity=42.0634920634921, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786917, Length=113, Percent_Identity=43.3628318584071, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI48994942, Length=111, Percent_Identity=43.2432432432432, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790020, Length=110, Percent_Identity=42.7272727272727, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 37403; Mature: 37272

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARDYIWNADGEVGGINDKLRGCLVFSYDRSGWLTSRTGQMYDHDHYYYDKAGNLLTDE
CCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCEEEECCCCEECCC
YQGAVMDNRLPGYGRDRYRYNEWGELTERRDQQLEWNAQGQLTRVISSNSETRYQYDALG
CCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEEEECCCCCCEEHHHHHH
RRISKATSNLHTDRGERSRTTFVWEGFRLLQETTWQGKRTYLYDAEQPYTPVAAITGRGE
HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCC
SQKIWYYHTDLTGTVHEVTAPDGTLVWAGYQAGFGENRGDISNSGAYFEQPQRLPGQYFD
CCEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EETGLHYNLFRYYAPECGRFVSQDPIGLNGGLNLYAYAPNPLGWIDPLGLNSLGIDSNNI
CCCCCEEEHHHHHCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCE
FRGDGNYKGGGIGQPKSGTISAQDIIDHL
EECCCCCCCCCCCCCCCCCEEHHHHHHCC
>Mature Secondary Structure 
TARDYIWNADGEVGGINDKLRGCLVFSYDRSGWLTSRTGQMYDHDHYYYDKAGNLLTDE
CCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCEEEECCCCEECCC
YQGAVMDNRLPGYGRDRYRYNEWGELTERRDQQLEWNAQGQLTRVISSNSETRYQYDALG
CCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEEEECCCCCCEEHHHHHH
RRISKATSNLHTDRGERSRTTFVWEGFRLLQETTWQGKRTYLYDAEQPYTPVAAITGRGE
HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCC
SQKIWYYHTDLTGTVHEVTAPDGTLVWAGYQAGFGENRGDISNSGAYFEQPQRLPGQYFD
CCEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EETGLHYNLFRYYAPECGRFVSQDPIGLNGGLNLYAYAPNPLGWIDPLGLNSLGIDSNNI
CCCCCEEEHHHHHCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCE
FRGDGNYKGGGIGQPKSGTISAQDIIDHL
EECCCCCCCCCCCCCCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1766878; 7934896 [H]