Click here to switch to the map view.

The map label for this gene is 30061789

Identifier: 30061789

GI number: 30061789

Start: 242699

End: 243073

Strand: Direct

Name: 30061789

Synonym: S0237

Alternate gene names: NA

Gene position: 242699-243073 (Clockwise)

Preceding gene: 30061788

Following gene: 30061790

Centisome position: 5.28

GC content: 50.93

Gene sequence:

>375_bases
ATGGAAACCAGCACGAGAAGGGCCGGCGGTGAGCAGCTCAAAGGGCAGTATGCAGACGCTGGATTTATGATGTTGCAGGA
GCATGCGACATGGCCTGATGGCGGTAACGCTGTTGAGCCAGGCATCACTGAATTGCGCGACATGATGCTCGATGGTCGCT
TCAAAGTATTCAATACCTGTGAGCCATTCTTTGAGGAGTTCCGCCTCTATCACCGTGATGAAAACGGGAAAATCGTCAAG
CTTAACGACGACGTGCTATCCGCCGTTCGCTATGCATACATGATGCGCCGCTTCGCAAAAATGATGCGCGACATCAAAAA
ACCAAAAGAGAAAAAGATACCAGCCCCAATCAGGCCCATCGCACGGAGAACTTAA

Upstream 100 bases:

>100_bases
TACGTTTCACGCGTGTGGAAGGCGAAAGAAAAAACAGCCGTTCAGGCGTGGGGAGCCGTTAAATCATGGGCGCATAAAGT
GCCAACCGCATGGCCTCATG

Downstream 100 bases:

>100_bases
ATGGCCGACGAAAACAGACTCAATTCCATTCTGTGTAAGTTTGACGCAGACTGGATGGCGAGCGATGAAGCCAGAACCGA
GGCGACAAATGACCTGTATT

Product: putative terminase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
METSTRRAGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVK
LNDDVLSAVRYAYMMRRFAKMMRDIKKPKEKKIPAPIRPIARRT

Sequences:

>Translated_124_residues
METSTRRAGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVK
LNDDVLSAVRYAYMMRRFAKMMRDIKKPKEKKIPAPIRPIARRT
>Mature_124_residues
METSTRRAGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVK
LNDDVLSAVRYAYMMRRFAKMMRDIKKPKEKKIPAPIRPIARRT

Specific function: Unknown

COG id: COG5565

COG function: function code R; Bacteriophage terminase large (ATPase) subunit and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14462; Mature: 14462

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSTRRAGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTC
CCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCH
EPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDIKKPKEKKIPAPIRPI
HHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
ARRT
CCCC
>Mature Secondary Structure
METSTRRAGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTC
CCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCH
EPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDIKKPKEKKIPAPIRPI
HHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
ARRT
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA