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The map label for this gene is 30061788

Identifier: 30061788

GI number: 30061788

Start: 242170

End: 242730

Strand: Direct

Name: 30061788

Synonym: S0236

Alternate gene names: NA

Gene position: 242170-242730 (Clockwise)

Preceding gene: 30061784

Following gene: 30061789

Centisome position: 5.27

GC content: 51.87

Gene sequence:

>561_bases
GTGTGGTTTGACGAAGAGCCACCATACAGCATTTATGGCGAAGGTCTTACCCGTACCAACAAATACGGGCAATTCTCAAT
TCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGAAGAACCCCAGCAAGTCGCAGAAAGTGG
TCAACATGACCATCTATGACGCTGAGCACTATACCGACGAGCAGAAAGAGCAAATCATCGCATCATATCCCGAGCATGAG
AGAGAGGCGCGTGCTCGCGGTATTCCTACGATGGGTAGTGGTCGAATCTTCCAGATACCGGAAGAGACGATTAAGTGTCA
GCCGTTCGAGTGTCCTGATCACTTCTACGTAATTGGCGGGATGGATTTCGGATGGGATCACCCACAGGCGCAAGTTCAGC
TTTGGTGGGATAAGGAGGCAGACACAATCTACGTTTCACGCGTGTGGAAGGCGAAAGAAAAAACAGCCGTTCAGGCGTGG
GGAGCCGTTAAATCATGGGCGCATAAAGTGCCAACCGCATGGCCTCATGATGGAAACCAGCACGAGAAGGGCCGGCGGTG
A

Upstream 100 bases:

>100_bases
GCATCACACGGCTGATGGCGTTGAAGATGGCATTTCAATCTGCTACTTCAAGCCATACTCGCAAGGCCGTGCTCGCTGGC
AGGGTGACACAATCCACGGC

Downstream 100 bases:

>100_bases
GCAGCTCAAAGGGCAGTATGCAGACGCTGGATTTATGATGTTGCAGGAGCATGCGACATGGCCTGATGGCGGTAACGCTG
TTGAGCCAGGCATCACTGAA

Product: putative terminase large subunit

Products: NA

Alternate protein names: Phage DNA Packaging

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHE
REARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGGMDFGWDHPQAQVQLWWDKEADTIYVSRVWKAKEKTAVQAW
GAVKSWAHKVPTAWPHDGNQHEKGRR

Sequences:

>Translated_186_residues
MWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHE
REARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGGMDFGWDHPQAQVQLWWDKEADTIYVSRVWKAKEKTAVQAW
GAVKSWAHKVPTAWPHDGNQHEKGRR
>Mature_186_residues
MWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHE
REARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGGMDFGWDHPQAQVQLWWDKEADTIYVSRVWKAKEKTAVQAW
GAVKSWAHKVPTAWPHDGNQHEKGRR

Specific function: Unknown

COG id: COG5565

COG function: function code R; Bacteriophage terminase large (ATPase) subunit and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21600; Mature: 21600

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYD
CCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEC
AEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGG
CHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCHHHHCCCCCCCCCCEEEEEC
MDFGWDHPQAQVQLWWDKEADTIYVSRVWKAKEKTAVQAWGAVKSWAHKVPTAWPHDGNQ
CCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HEKGRR
CCCCCC
>Mature Secondary Structure
MWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYD
CCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEC
AEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGG
CHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCHHHHCCCCCCCCCCEEEEEC
MDFGWDHPQAQVQLWWDKEADTIYVSRVWKAKEKTAVQAWGAVKSWAHKVPTAWPHDGNQ
CCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HEKGRR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA