| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is menE
Identifier: 30024008
GI number: 30024008
Start: 732881
End: 734236
Strand: Reverse
Name: menE
Synonym: L0172
Alternate gene names: 30024008
Gene position: 734236-732881 (Counterclockwise)
Preceding gene: 15672711
Following gene: 15672709
Centisome position: 31.04
GC content: 38.27
Gene sequence:
>1356_bases ATGAAATGGTTAAAAAAACAGGCGGAACTTTATCCCCAAAAACAATTTTTAAATGACTCTACTTTTGCCCAAATCAATCA GGAAGTCAATAAGATGGCTGAACATTTGGCCCCCCTTATTGACAATCAATCACGGGTTGCGCTCCTTTCAGAAAACTCTG TTGAAATGGCAGTCGTTTTGTTTGCCTTGCTCGGTTTGTCAAAAGAGGTTCTTCTTTTGAATAGGCATCTGACCGAATAC GAACTGGCTGACCAAATCAAGGAACTCAAAATTGACAAAGTCTTTACTTCGGATTTACTGACAGAAAAAGTTACTGACAG CATTTCTTTTTCGGAAATTTGGACTAGTAACCCTTGCCCTGTAAGTCTGTCAGCAGATTTTCCTGATGAAAAAATTGCAG TCATCATGAACACTTCCGCTACTACCGGAAAATTTAAATCTGTCCCTATTACTTGGGGCATGATTTCAAATCACGTCAAA GCCTCAAAGGAAACGCTTGGCGCTTATGACAATGATAATTGGCTTGTCATCTTACCTATGTTTCATGTCTCTGGGCTTTC CATTATTATGCGTACTTTATATAATGCAACATCAGCGACCGTTGTTGATAAATTTGATGAAAACCAACTTCTTGAAATGA TCAATTCTGGGAAAATCAACATGGTTTCACTCGTCCCAACCCTCCTTACAAGAATTGCTGACAAATTGCATAGCAATAAC TTACGTTTAATTCTACTTGGTGGTGAATTTATTCCCCAACCTTTAATCAAAAAATGCCAAGAATTAGGTCTTCCTATTTA CAAAACTTATGGAATGACTGAAAGTTTTTCACAATCTGTCACTTTTAATATTTTAGATTTCCCTGATAAAACAAGCTCTG TCGGGCGGCCTTTACCAGGTGTTGAAATTGAGATTCGTCAAGCTGACCTTGCTGGCGTTGGTGAAATTTGGTTAAAATCT CCGATGTTGATGAAAGCTTACCTAGGCCAAAAGCCTTACGGCACAGCTTTTGAAACAGGCGATATTGGTTATCTTGATAC GGACGGTTTTCTCTATCTGCTCAATCGCAGAAAAGATATCATTATTTCTGGCGGTGAAAATATTTACCCCAAAGAAATCG AAGATTTAGTTTATTCTCTTCCTGAAATCAAGGAATGTGCACTTGTTGCTAAGCCAGATGCCAAGTGGGGACAAGTGCCA ATTCTCTTCGTTTCAGGCAATATTTCCCAAGAAAAATTAGAAAACTTTCTCACTGAAAAACTGGCAAAATACAAACGACC ACAATCCATCACTTTCATGGATGAATTGCCCAAAAATGCTTCTGGAAAAATCTTGAGAAAAGAGCTTAAAGGATGA
Upstream 100 bases:
>100_bases TCTTTTTGACGCTTTTTGTGATTTAAAAGTTACTGACAGGATTTCTGTCAGTAAAAAATACACAGAAAGGAGAAAATCGA GTTCGCTCACGTCTTAAAAT
Downstream 100 bases:
>100_bases TAATTGAAAAAATTACAATGTTTCATGTTCAACTCCCTATGAAATTTAATTTTAAGACCGCCAAAGGTTCCTTAAATCTC CGAGATACAATTATTATAAA
Product: O-succinylbenzoic acid-CoA ligase
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKWLKKQAELYPQKQFLNDSTFAQINQEVNKMAEHLAPLIDNQSRVALLSENSVEMAVVLFALLGLSKEVLLLNRHLTEY ELADQIKELKIDKVFTSDLLTEKVTDSISFSEIWTSNPCPVSLSADFPDEKIAVIMNTSATTGKFKSVPITWGMISNHVK ASKETLGAYDNDNWLVILPMFHVSGLSIIMRTLYNATSATVVDKFDENQLLEMINSGKINMVSLVPTLLTRIADKLHSNN LRLILLGGEFIPQPLIKKCQELGLPIYKTYGMTESFSQSVTFNILDFPDKTSSVGRPLPGVEIEIRQADLAGVGEIWLKS PMLMKAYLGQKPYGTAFETGDIGYLDTDGFLYLLNRRKDIIISGGENIYPKEIEDLVYSLPEIKECALVAKPDAKWGQVP ILFVSGNISQEKLENFLTEKLAKYKRPQSITFMDELPKNASGKILRKELKG
Sequences:
>Translated_451_residues MKWLKKQAELYPQKQFLNDSTFAQINQEVNKMAEHLAPLIDNQSRVALLSENSVEMAVVLFALLGLSKEVLLLNRHLTEY ELADQIKELKIDKVFTSDLLTEKVTDSISFSEIWTSNPCPVSLSADFPDEKIAVIMNTSATTGKFKSVPITWGMISNHVK ASKETLGAYDNDNWLVILPMFHVSGLSIIMRTLYNATSATVVDKFDENQLLEMINSGKINMVSLVPTLLTRIADKLHSNN LRLILLGGEFIPQPLIKKCQELGLPIYKTYGMTESFSQSVTFNILDFPDKTSSVGRPLPGVEIEIRQADLAGVGEIWLKS PMLMKAYLGQKPYGTAFETGDIGYLDTDGFLYLLNRRKDIIISGGENIYPKEIEDLVYSLPEIKECALVAKPDAKWGQVP ILFVSGNISQEKLENFLTEKLAKYKRPQSITFMDELPKNASGKILRKELKG >Mature_451_residues MKWLKKQAELYPQKQFLNDSTFAQINQEVNKMAEHLAPLIDNQSRVALLSENSVEMAVVLFALLGLSKEVLLLNRHLTEY ELADQIKELKIDKVFTSDLLTEKVTDSISFSEIWTSNPCPVSLSADFPDEKIAVIMNTSATTGKFKSVPITWGMISNHVK ASKETLGAYDNDNWLVILPMFHVSGLSIIMRTLYNATSATVVDKFDENQLLEMINSGKINMVSLVPTLLTRIADKLHSNN LRLILLGGEFIPQPLIKKCQELGLPIYKTYGMTESFSQSVTFNILDFPDKTSSVGRPLPGVEIEIRQADLAGVGEIWLKS PMLMKAYLGQKPYGTAFETGDIGYLDTDGFLYLLNRRKDIIISGGENIYPKEIEDLVYSLPEIKECALVAKPDAKWGQVP ILFVSGNISQEKLENFLTEKLAKYKRPQSITFMDELPKNASGKILRKELKG
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA)
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
Homologues:
Organism=Homo sapiens, GI187761345, Length=387, Percent_Identity=27.1317829457364, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI187761343, Length=387, Percent_Identity=27.1317829457364, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI156151445, Length=354, Percent_Identity=28.2485875706215, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI42544132, Length=279, Percent_Identity=28.3154121863799, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI38505220, Length=277, Percent_Identity=27.0758122743682, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI122937307, Length=237, Percent_Identity=30.379746835443, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI115511026, Length=126, Percent_Identity=35.7142857142857, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI157311624, Length=294, Percent_Identity=26.530612244898, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI157311622, Length=294, Percent_Identity=26.530612244898, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI58082049, Length=238, Percent_Identity=26.0504201680672, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI27477105, Length=179, Percent_Identity=31.2849162011173, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI13375727, Length=121, Percent_Identity=31.404958677686, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1788595, Length=337, Percent_Identity=30.5637982195846, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1788107, Length=514, Percent_Identity=25.875486381323, Blast_Score=131, Evalue=7e-32, Organism=Escherichia coli, GI221142682, Length=488, Percent_Identity=25, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI145693145, Length=380, Percent_Identity=28.4210526315789, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1786810, Length=491, Percent_Identity=24.6435845213849, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789201, Length=450, Percent_Identity=24.6666666666667, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1786529, Length=371, Percent_Identity=25.3369272237197, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790505, Length=467, Percent_Identity=23.1263383297645, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17558820, Length=485, Percent_Identity=28.4536082474227, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17559526, Length=439, Percent_Identity=28.0182232346241, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI32563687, Length=443, Percent_Identity=29.1196388261851, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17557194, Length=490, Percent_Identity=25.1020408163265, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI17531443, Length=362, Percent_Identity=27.6243093922652, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17538037, Length=494, Percent_Identity=24.2914979757085, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71985884, Length=346, Percent_Identity=28.0346820809249, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71996755, Length=297, Percent_Identity=29.2929292929293, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI25141359, Length=431, Percent_Identity=24.5939675174014, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17560308, Length=357, Percent_Identity=25.4901960784314, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560140, Length=356, Percent_Identity=25.561797752809, Blast_Score=95, Evalue=8e-20, Organism=Caenorhabditis elegans, GI71994690, Length=355, Percent_Identity=25.0704225352113, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71994694, Length=355, Percent_Identity=25.0704225352113, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71994703, Length=355, Percent_Identity=25.0704225352113, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17556356, Length=334, Percent_Identity=27.5449101796407, Blast_Score=75, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6319699, Length=360, Percent_Identity=30, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6319264, Length=289, Percent_Identity=25.9515570934256, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323182, Length=295, Percent_Identity=24.0677966101695, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355181, Length=461, Percent_Identity=28.1995661605206, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI20130357, Length=401, Percent_Identity=26.9326683291771, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI24581924, Length=359, Percent_Identity=27.2980501392758, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI18859661, Length=387, Percent_Identity=25.0645994832041, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI21356947, Length=349, Percent_Identity=24.6418338108883, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI24653035, Length=351, Percent_Identity=25.0712250712251, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI161076582, Length=355, Percent_Identity=25.0704225352113, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24648260, Length=353, Percent_Identity=22.6628895184136, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI19922652, Length=370, Percent_Identity=22.4324324324324, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24648257, Length=359, Percent_Identity=23.1197771587744, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI21355225, Length=367, Percent_Identity=26.9754768392371, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356441, Length=294, Percent_Identity=24.4897959183673, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24648255, Length=352, Percent_Identity=23.0113636363636, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24648253, Length=352, Percent_Identity=23.0113636363636, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19921316, Length=154, Percent_Identity=33.1168831168831, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI281365686, Length=365, Percent_Identity=25.4794520547945, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI21358303, Length=310, Percent_Identity=25.4838709677419, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MENE_LACLA (Q9CHK3)
Other databases:
- EMBL: AE005176 - PIR: H86715 - RefSeq: NP_266884.2 - ProteinModelPortal: Q9CHK3 - GeneID: 1114354 - GenomeReviews: AE005176_GR - KEGG: lla:L0172 - NMPDR: fig|272623.1.peg.747 - HOGENOM: HBG547964 - OMA: ENIAPSE - ProtClustDB: CLSK643928 - BioCyc: LLAC272623:L0172-MONOMER - BRENDA: 6.2.1.26 - HAMAP: MF_00731 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 - TIGRFAMs: TIGR01923
Pfam domain/function: PF00501 AMP-binding
EC number: =6.2.1.26
Molecular weight: Translated: 50578; Mature: 50578
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLKKQAELYPQKQFLNDSTFAQINQEVNKMAEHLAPLIDNQSRVALLSENSVEMAVVL CCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH FALLGLSKEVLLLNRHLTEYELADQIKELKIDKVFTSDLLTEKVTDSISFSEIWTSNPCP HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC VSLSADFPDEKIAVIMNTSATTGKFKSVPITWGMISNHVKASKETLGAYDNDNWLVILPM EEEECCCCCCEEEEEEECCCCCCCCEECCEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEC FHVSGLSIIMRTLYNATSATVVDKFDENQLLEMINSGKINMVSLVPTLLTRIADKLHSNN HHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCC LRLILLGGEFIPQPLIKKCQELGLPIYKTYGMTESFSQSVTFNILDFPDKTSSVGRPLPG EEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHCCCEEEEEEECCCCCCCCCCCCCC VEIEIRQADLAGVGEIWLKSPMLMKAYLGQKPYGTAFETGDIGYLDTDGFLYLLNRRKDI CEEEEEECCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEECCCEE IISGGENIYPKEIEDLVYSLPEIKECALVAKPDAKWGQVPILFVSGNISQEKLENFLTEK EEECCCCCCHHHHHHHHHCCCCHHHCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHH LAKYKRPQSITFMDELPKNASGKILRKELKG HHHHCCCCCEEHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure MKWLKKQAELYPQKQFLNDSTFAQINQEVNKMAEHLAPLIDNQSRVALLSENSVEMAVVL CCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH FALLGLSKEVLLLNRHLTEYELADQIKELKIDKVFTSDLLTEKVTDSISFSEIWTSNPCP HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC VSLSADFPDEKIAVIMNTSATTGKFKSVPITWGMISNHVKASKETLGAYDNDNWLVILPM EEEECCCCCCEEEEEEECCCCCCCCEECCEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEC FHVSGLSIIMRTLYNATSATVVDKFDENQLLEMINSGKINMVSLVPTLLTRIADKLHSNN HHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCC LRLILLGGEFIPQPLIKKCQELGLPIYKTYGMTESFSQSVTFNILDFPDKTSSVGRPLPG EEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHCCCEEEEEEECCCCCCCCCCCCCC VEIEIRQADLAGVGEIWLKSPMLMKAYLGQKPYGTAFETGDIGYLDTDGFLYLLNRRKDI CEEEEEECCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEECCCEE IISGGENIYPKEIEDLVYSLPEIKECALVAKPDAKWGQVPILFVSGNISQEKLENFLTEK EEECCCCCCHHHHHHHHHCCCCHHHCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHH LAKYKRPQSITFMDELPKNASGKILRKELKG HHHHCCCCCEEHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11337471