| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is menB
Identifier: 15672711
GI number: 15672711
Start: 734363
End: 735205
Strand: Reverse
Name: menB
Synonym: L0171
Alternate gene names: 15672711
Gene position: 735205-734363 (Counterclockwise)
Preceding gene: 15672712
Following gene: 30024008
Centisome position: 31.08
GC content: 41.64
Gene sequence:
>843_bases ATGTCAAAATTTAACTGGGTTGCTCTCAACCGTAACTACGAAGATATTATTTATGAAACTTATGATGGAATTGCTAAAAT TACCATCAATCGTCCTGAAGTCCGCAATGCCTTCCGTCCCAAAACTGTCGTTGAAATGATTGATGCTTTTAGTGTCGCTC GTGATGATACCAATGTCGGCGTGATTATTTTGACTGGTGCAAATCATGGAAAAGGTGAAGATAAAGAAGCCTTTTGTTCT GGTGGTGACCAAAAAGTACGTGGAAATGGTGGATATGTTGGTGAAGACCAAATTCCTCGTTTGAACGTTTTAGATTTGCA ACATTTGATTCGGATTACACCAAAACCTGTCATTGCTATGGTAAATGGTTTTGCCATTGGTGGAGGTCACGTGTTACATA TCGTTTGTGATTTGACTATCGCTTCTGAAAACGCAAAATTTGGGCAAACTGGTCCGCGTGTTGGTTCTTTTGATGCTGGT TATGGTGCTGGTTTACTTGCCGCTATGGTTGGGCAAAAGAAAGCACGTGAAATATGGTTCCTCTGCCGTCAATATACTGC CCAAGAAGCAATGGACATGGGAATGGTTAATACTGTTGTTCCATTTGACCGTCTTGAAGAAGAAACCGTTCAATGGGCCC AAGAAATGCTTGCCCTCTCACCAATGGCACTTCGTATGCTCAAAGGTTCAATGAATGCTGCAACTGACGGACTTGCTGGA CTGCAACAATTTGCAGGAGATGCAACACTTATGTTCTATACTACGGATGAAGCCAAAGAAGGACGCGATGCTTTCAAAGA AAAACGCAAACCTGATTTTGACCAATTTCCAAAATTCCCATAA
Upstream 100 bases:
>100_bases TGATGAAAATAGATAAAATGGAACTTGGGCTATGCCCAGAACCGCATTTTTCTAATTTTCACAACTTCTAGCGCTCGTCC TCACATCTTAAAGGAGAATC
Downstream 100 bases:
>100_bases AAATTTCCCAAATTGCTGACAAAGCGTCTTTTTGACGCTTTTTGTGATTTAAAAGTTACTGACAGGATTTCTGTCAGTAA AAAATACACAGAAAGGAGAA
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSKFNWVALNRNYEDIIYETYDGIAKITINRPEVRNAFRPKTVVEMIDAFSVARDDTNVGVIILTGANHGKGEDKEAFCS GGDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAMVNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAG YGAGLLAAMVGQKKAREIWFLCRQYTAQEAMDMGMVNTVVPFDRLEEETVQWAQEMLALSPMALRMLKGSMNAATDGLAG LQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP
Sequences:
>Translated_280_residues MSKFNWVALNRNYEDIIYETYDGIAKITINRPEVRNAFRPKTVVEMIDAFSVARDDTNVGVIILTGANHGKGEDKEAFCS GGDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAMVNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAG YGAGLLAAMVGQKKAREIWFLCRQYTAQEAMDMGMVNTVVPFDRLEEETVQWAQEMLALSPMALRMLKGSMNAATDGLAG LQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP >Mature_279_residues SKFNWVALNRNYEDIIYETYDGIAKITINRPEVRNAFRPKTVVEMIDAFSVARDDTNVGVIILTGANHGKGEDKEAFCSG GDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAMVNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAGY GAGLLAAMVGQKKAREIWFLCRQYTAQEAMDMGMVNTVVPFDRLEEETVQWAQEMLALSPMALRMLKGSMNAATDGLAGL QQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=268, Percent_Identity=33.2089552238806, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI31542718, Length=267, Percent_Identity=29.5880149812734, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI45643119, Length=221, Percent_Identity=27.6018099547511, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI260275230, Length=221, Percent_Identity=27.6018099547511, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI260274832, Length=221, Percent_Identity=27.6018099547511, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4757966, Length=224, Percent_Identity=25.8928571428571, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI51538581, Length=224, Percent_Identity=25.8928571428571, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI25453481, Length=224, Percent_Identity=25.8928571428571, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI51538573, Length=224, Percent_Identity=25.8928571428571, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4502327, Length=269, Percent_Identity=27.8810408921933, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1788597, Length=277, Percent_Identity=63.5379061371841, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1787659, Length=263, Percent_Identity=31.1787072243346, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI221142681, Length=257, Percent_Identity=30.3501945525292, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87082183, Length=270, Percent_Identity=27.4074074074074, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787660, Length=267, Percent_Identity=29.5880149812734, Blast_Score=78, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17554946, Length=254, Percent_Identity=32.6771653543307, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI25145438, Length=255, Percent_Identity=32.5490196078431, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17540714, Length=217, Percent_Identity=27.1889400921659, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560910, Length=197, Percent_Identity=29.4416243654822, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17549921, Length=224, Percent_Identity=25.4464285714286, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17535521, Length=211, Percent_Identity=24.1706161137441, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129971, Length=277, Percent_Identity=31.7689530685921, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI24653477, Length=277, Percent_Identity=31.7689530685921, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI24653139, Length=269, Percent_Identity=28.6245353159851, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21357171, Length=195, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922422, Length=266, Percent_Identity=24.0601503759398, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650670, Length=193, Percent_Identity=30.5699481865285, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24654903, Length=268, Percent_Identity=23.134328358209, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 30881; Mature: 30749
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFNWVALNRNYEDIIYETYDGIAKITINRPEVRNAFRPKTVVEMIDAFSVARDDTNVG CCCCEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCEE VIILTGANHGKGEDKEAFCSGGDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAM EEEEECCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHEEE VNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAGYGAGLLAAMVGQKKAREIWF ECCEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH LCRQYTAQEAMDMGMVNTVVPFDRLEEETVQWAQEMLALSPMALRMLKGSMNAATDGLAG HHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP HHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHCCCCC >Mature Secondary Structure SKFNWVALNRNYEDIIYETYDGIAKITINRPEVRNAFRPKTVVEMIDAFSVARDDTNVG CCCEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCEE VIILTGANHGKGEDKEAFCSGGDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAM EEEEECCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHEEE VNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAGYGAGLLAAMVGQKKAREIWF ECCEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH LCRQYTAQEAMDMGMVNTVVPFDRLEEETVQWAQEMLALSPMALRMLKGSMNAATDGLAG HHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP HHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1629163; 8566759; 9387221; 9384377 [H]