Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350149

Identifier: 29350149

GI number: 29350149

Start: 6220589

End: 6221977

Strand: Reverse

Name: 29350149

Synonym: BT_4741

Alternate gene names: NA

Gene position: 6221977-6220589 (Counterclockwise)

Preceding gene: 29350150

Following gene: 29350148

Centisome position: 99.39

GC content: 30.89

Gene sequence:

>1389_bases
ATGGTTACAATATATTTGGATAAACAAGTTTTCAGTCATCTATTTAATGCAAAAGAAGAAAAGTATTCTCTTTTGCGTGA
AAAGATATTATCTCACAAAGATGAGTTTATTTTCTTCTACTCAAATGCTCATTTATTTGATTTGCAAGATGATAAAACGG
ATATTAAATATACTGAAATGGAATATATGCAATCGATAGTAAGTGGATATCATTTAATATACGAAAACCATAAACAGGAA
GTTATAAAGCAATCCCCACGCAATGCTTTCGAAACTATAGGCAAAATAGAGGATTTCTCTTGGCTTGAAAATTTTGATTT
TTCACAAATAACAGAAGAACAGCGGAATGTTATCAATAACATTGTTGATATTAGCATTAAGGATTTAAAAGGTGAATTAG
ATTTTGATTGGCTAAAAAAAAGAGCCCCAATTTCAGTCGATGAACTCCAAATGGACATATCAACTTTTACATCATTAATG
AAATTCGTCTCCCACTATTTTTATGAGAATAAGGAGTCATACAAAATTATGAGAGACAATACTATTGCTAGATATAATCC
GACATCAATTAAAGCGGAAGGTGAAAATGTTTTTAACGAGCAGTTAGCCTCATCTCCATTAGGATTATCCTTTCTAGATA
TTATTCAAGCCTCTTTAACTCAAACAGGATTATCATACACTGATTTTGCAACGGTATATTATATGTCATATATACTTCTT
GATCTATTTGGAGTTAATAAAGAAACCCGGAAGAAGGTTAAGTTTAGAAATATGCAAGTCGACTGTTACCACAGTTTCTT
CGGCTCATACTGCGATTGCATGGTTAGTGATGACGAAGGTATGCGCCTCAAGAGCAAAACATTATACAAACTTTTCAATT
TCAACACTAAAGTATATTCAATAGATGAGTTTATAGAAAAATTTGATGAAGCAATAAATAACAATAAAAAATCTGCGCGT
GAATATTTTGATGAAGTTCTTAGCGATTATATTACAAGGCAAGTAACTAGAGTCGAAACAAAATCTGGGCAATTTTTAAC
TTATCTGAGTACTTCTTATAAATACTTCGGATATTTTAACTGCATGATAGAAAGAAAATCAAAAGATGAGACGGTTATTA
TACTCCATAAGAACAACGACTTGAAGCAACCTATTCTGGCGAAAGAATTAGAGATTATAACTAATAGGATTGTTAGAGTG
TTTAATGATATGGGAGCTACCTTTACTTTATTCGATGAAGCAGTAGAAATCCCTCTATTAAAAGCTGACAATTGGAATAG
ATTTCTAACGTTAAATGATGCTGATGTGTGTTTAACTAAATTCAAAGATACACCTATGTTGTGTTTATGGATTAAGTTAA
AGCAGCCAATATTACAAAATAAAAATTGA

Upstream 100 bases:

>100_bases
AAGACAAAGAAGATTAAAAAAATCTTCCAGAAATACAACGAAAAGGTTTAGTATTGAAGAAGGTAAAAACAACAAACAAA
TCGTTATTATTTTACAATTT

Downstream 100 bases:

>100_bases
AGAAATTAAAGATTCCTGCAACAAGCCACTGACGAGGATATAGTGGTTTCCGATTTGTGTCTGCTCGCTAGTATGTATCA
ACTTGTTGCGTTGAATACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEMEYMQSIVSGYHLIYENHKQE
VIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINNIVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLM
KFVSHYFYENKESYKIMRDNTIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL
DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYSIDEFIEKFDEAINNNKKSAR
EYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFNCMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRV
FNDMGATFTLFDEAVEIPLLKADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN

Sequences:

>Translated_462_residues
MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEMEYMQSIVSGYHLIYENHKQE
VIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINNIVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLM
KFVSHYFYENKESYKIMRDNTIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL
DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYSIDEFIEKFDEAINNNKKSAR
EYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFNCMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRV
FNDMGATFTLFDEAVEIPLLKADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN
>Mature_462_residues
MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEMEYMQSIVSGYHLIYENHKQE
VIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINNIVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLM
KFVSHYFYENKESYKIMRDNTIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL
DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYSIDEFIEKFDEAINNNKKSAR
EYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFNCMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRV
FNDMGATFTLFDEAVEIPLLKADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54578; Mature: 54578

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEM
CEEEEECHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCHHHH
EYMQSIVSGYHLIYENHKQEVIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHH
IVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLMKFVSHYFYENKESYKIMRDN
HHCEEEHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
TIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL
EEEEECCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYS
HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCEEHHHHHHHHHCCCCEEEE
IDEFIEKFDEAINNNKKSAREYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCEEEEEE
CMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRVFNDMGATFTLFDEAVEIPLL
EEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCEEE
KADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN
ECCCCCEEEEECCHHHHHHHCCCCCEEEEEEEHHHHHHCCCC
>Mature Secondary Structure
MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEM
CEEEEECHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCHHHH
EYMQSIVSGYHLIYENHKQEVIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHH
IVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLMKFVSHYFYENKESYKIMRDN
HHCEEEHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
TIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL
EEEEECCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYS
HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCEEHHHHHHHHHCCCCEEEE
IDEFIEKFDEAINNNKKSAREYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCEEEEEE
CMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRVFNDMGATFTLFDEAVEIPLL
EEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCEEE
KADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN
ECCCCCEEEEECCHHHHHHHCCCCCEEEEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA