Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350090

Identifier: 29350090

GI number: 29350090

Start: 6140802

End: 6143240

Strand: Reverse

Name: 29350090

Synonym: BT_4682

Alternate gene names: NA

Gene position: 6143240-6140802 (Counterclockwise)

Preceding gene: 29350091

Following gene: 29350089

Centisome position: 98.13

GC content: 44.28

Gene sequence:

>2439_bases
ATGAGAAAGAAACATTCGCTCCTATTTTGTGCCTTATTTACGATTTTTACGGGACATGCAGAAGATACGGATTATACCAA
AGGACTTTCTATCTGGTTTGATTCTCCCAATACATTACAAGGAAAAGAAGTCTGGCATAGTTCCAAACAGGATGCCAGTT
GGGAATCACAGTCATTGCCTATAGGTAATGGAAGTATCGGTGCTAATATTTTGGGTTCAATAGAGGCGGAACGCATAACT
TTTAATGAGAAAACGCTTTGGCGTGGCGGTCCTAATACAGCCAAAGGAGCAGATTACTATTGGAATGTGAACAAACAGTC
CGCGCACATCCTGGACGAAATACGTAAAGCATTCGTAGAAGGAGACCAGAAAAAAGCGGAAAAACTGACACGCGAGAATT
TCAACAGTGAAGTCCCTTATGAATTTTCCAGAGAAAAGCCTTTCCGGTTTGGTAACTTCACTACAATGGGAGAATTCTAT
GTAGAAACAGGATTAAGCACAATAGGCATGAGTGACTACAAACGTATCTTATCATTGGATTCGGCAATGGCGGTGGTTCA
GTTCAAAAAAGATGACGTAGCATATCAGCGTAACTATTTTATTTCTTACCCTGCCAATGTGATGGTGATGCGTTTCAGTG
CCGACCAACCGGGCAAACAGAATCTCACTTTCAGATATGCCCCCAATCCGGTATCTACAGGGCAGTTCTCTGCCGACGGT
AATAATGGTCTTGTTTATACGGCTTCTCTGGATAATAATGGAATGAAATATGCAGTCCGTATTCAGGCAACAGTAAAAGG
CGGTACCTTAAACAACACAGATGGACGGATTACAGTGAAAGAAGCTGATGAAGTCGTATTCTATGTGACTGCAGATACCG
ATTATAAAATGAATTTCGCACCGGACTTTACCGATCCAAAAACATATGTCGGCGTTAATCCGCTTGAAACAACCCAGCAA
TGGATGAAGGATGCCGTATCCAAAGGATATTCCAACTTACTGGACGAACACTACAAAGACTACGCTTCTTTGTTCAACCG
AGTGAAACTGGAATTGAATCCTACAGTGAAAACATCCAATCTGCCCACTGCTCAACGACTGAAAAACTATCGGAACGGAC
AACCTGACTACTACTTGGAAAAGCTCTATTACCAGTTCGGACGCTATCTGTTGATAGCCAGTTCCCGACCGGGTAATATG
CCTGCCAATCTGCAAGGCATCTGGCATAACAACATAGACGGCCCCTGGCGTGTGGATTATCATAATAACATTAATATCCA
AATGAACTACTGGCCGGCCTGCTCTACAAACCTGGATGAGTGCATGCTCCCGCTAATTGATTTCATCCGTACCTTAGTGA
AACCGGGTGAAAAGACCGCTCAGTCTTATTTTGGTGCAAGAGGATGGACAGCATCTATTTCCGCCAACATCTTTGGCTTT
ACTACCCCATTGGAAAGTCAGGACATGTCCTGGAACTTTAATCCGATGGCAGGTCCCTGGCTGGCAACTCACGTTTGGGA
ATATTATGACTATACCAAGGACCTGAAATTCCTGAAAGAAACAGGATATGAACTGATTAAGAGCAGCGCCAACTTTACTG
TTGACTATCTCTGGCATAAACCGGACGGAACGTATACGGCTGCCCCCTCTACTTCACCGGAACACGGCCCTATCGATCAG
GGAGCTACATTTGTGCATGCAGTTGTCCGTGAAATCCTGCTGGATGCTATCCAAGCGAGCAAAGAATTGGGAATAGACAA
AAAGGAACGTAAACAATGGGAGCACGTGCTTGCCAATCTCGTCCCTTATAAAATAGGTCGCTATGGTCAGTTACTGGAAT
GGTCAACCGATATCGACGATCCGAAAGACGAACATCGCCATGTAAATCATCTCTTCGGTCTGCATCCCGGACACACTGTT
TCTCCTGTCACTACTCCCGAACTGGCAGAAGCAGCCAAAGTTGTATTGGTGCATCGTGGTGACGGAGCTACCGGCTGGAG
TATGGGATGGAAGTTGAACCAGTGGGCACGCTTACAAGATGGAAATCACGCTTATACCCTCTTTGGTAATCTGCTGAAAA
ACGGAACAGTAGATAACCTTTGGGATACACACCCACCCTTCCAGATTGACGGAAACTTTGGCGGCACAGCCGGTATCACA
GAAATGCTATTACAGAGCCACATGGGATTCATCCAATTACTACCTGCTTTACCGGATGCCTGGAAAGACGGCTCTATTTA
TGGCATATGCGCAAAAGGAAATTTCGAGATAGATATTGCATGGAAAGACGGACTTCTAAAAGAAGCGACTATCCTGTCCA
AAGCAGGACAGAATTGTATCGTGAAGTACGCCGGTCAAACAATCTCTTTTAAAACAGTGAAAGGGCGTAGCTATCAGCTA
AAATACGACAAAGAGAATGGATTAATAAAAATCAAATAA

Upstream 100 bases:

>100_bases
AGCTGTTTTTTTATTACTTTTGTGCCTTCAGCCCCAAAGAGCTGTAACACACTTAAATTCATGAAATATACTTTTATCTA
ATAATAAACACGCTACGACA

Downstream 100 bases:

>100_bases
TAACATAACACTTTAACCTATGTCATCTTAGATGAATACAAAAACATTTACCCCCAAATCGACCATGAAAATTTATACTT
GTCTTTGCTTGCTTTTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Trehalose And Maltose Hydrolase-Like Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Fibronectin Type III Domain-Containing Protein; Glycosyl Hydrolase Family Protein; 1 2-A-L-Fucosidase

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MRKKHSLLFCALFTIFTGHAEDTDYTKGLSIWFDSPNTLQGKEVWHSSKQDASWESQSLPIGNGSIGANILGSIEAERIT
FNEKTLWRGGPNTAKGADYYWNVNKQSAHILDEIRKAFVEGDQKKAEKLTRENFNSEVPYEFSREKPFRFGNFTTMGEFY
VETGLSTIGMSDYKRILSLDSAMAVVQFKKDDVAYQRNYFISYPANVMVMRFSADQPGKQNLTFRYAPNPVSTGQFSADG
NNGLVYTASLDNNGMKYAVRIQATVKGGTLNNTDGRITVKEADEVVFYVTADTDYKMNFAPDFTDPKTYVGVNPLETTQQ
WMKDAVSKGYSNLLDEHYKDYASLFNRVKLELNPTVKTSNLPTAQRLKNYRNGQPDYYLEKLYYQFGRYLLIASSRPGNM
PANLQGIWHNNIDGPWRVDYHNNINIQMNYWPACSTNLDECMLPLIDFIRTLVKPGEKTAQSYFGARGWTASISANIFGF
TTPLESQDMSWNFNPMAGPWLATHVWEYYDYTKDLKFLKETGYELIKSSANFTVDYLWHKPDGTYTAAPSTSPEHGPIDQ
GATFVHAVVREILLDAIQASKELGIDKKERKQWEHVLANLVPYKIGRYGQLLEWSTDIDDPKDEHRHVNHLFGLHPGHTV
SPVTTPELAEAAKVVLVHRGDGATGWSMGWKLNQWARLQDGNHAYTLFGNLLKNGTVDNLWDTHPPFQIDGNFGGTAGIT
EMLLQSHMGFIQLLPALPDAWKDGSIYGICAKGNFEIDIAWKDGLLKEATILSKAGQNCIVKYAGQTISFKTVKGRSYQL
KYDKENGLIKIK

Sequences:

>Translated_812_residues
MRKKHSLLFCALFTIFTGHAEDTDYTKGLSIWFDSPNTLQGKEVWHSSKQDASWESQSLPIGNGSIGANILGSIEAERIT
FNEKTLWRGGPNTAKGADYYWNVNKQSAHILDEIRKAFVEGDQKKAEKLTRENFNSEVPYEFSREKPFRFGNFTTMGEFY
VETGLSTIGMSDYKRILSLDSAMAVVQFKKDDVAYQRNYFISYPANVMVMRFSADQPGKQNLTFRYAPNPVSTGQFSADG
NNGLVYTASLDNNGMKYAVRIQATVKGGTLNNTDGRITVKEADEVVFYVTADTDYKMNFAPDFTDPKTYVGVNPLETTQQ
WMKDAVSKGYSNLLDEHYKDYASLFNRVKLELNPTVKTSNLPTAQRLKNYRNGQPDYYLEKLYYQFGRYLLIASSRPGNM
PANLQGIWHNNIDGPWRVDYHNNINIQMNYWPACSTNLDECMLPLIDFIRTLVKPGEKTAQSYFGARGWTASISANIFGF
TTPLESQDMSWNFNPMAGPWLATHVWEYYDYTKDLKFLKETGYELIKSSANFTVDYLWHKPDGTYTAAPSTSPEHGPIDQ
GATFVHAVVREILLDAIQASKELGIDKKERKQWEHVLANLVPYKIGRYGQLLEWSTDIDDPKDEHRHVNHLFGLHPGHTV
SPVTTPELAEAAKVVLVHRGDGATGWSMGWKLNQWARLQDGNHAYTLFGNLLKNGTVDNLWDTHPPFQIDGNFGGTAGIT
EMLLQSHMGFIQLLPALPDAWKDGSIYGICAKGNFEIDIAWKDGLLKEATILSKAGQNCIVKYAGQTISFKTVKGRSYQL
KYDKENGLIKIK
>Mature_812_residues
MRKKHSLLFCALFTIFTGHAEDTDYTKGLSIWFDSPNTLQGKEVWHSSKQDASWESQSLPIGNGSIGANILGSIEAERIT
FNEKTLWRGGPNTAKGADYYWNVNKQSAHILDEIRKAFVEGDQKKAEKLTRENFNSEVPYEFSREKPFRFGNFTTMGEFY
VETGLSTIGMSDYKRILSLDSAMAVVQFKKDDVAYQRNYFISYPANVMVMRFSADQPGKQNLTFRYAPNPVSTGQFSADG
NNGLVYTASLDNNGMKYAVRIQATVKGGTLNNTDGRITVKEADEVVFYVTADTDYKMNFAPDFTDPKTYVGVNPLETTQQ
WMKDAVSKGYSNLLDEHYKDYASLFNRVKLELNPTVKTSNLPTAQRLKNYRNGQPDYYLEKLYYQFGRYLLIASSRPGNM
PANLQGIWHNNIDGPWRVDYHNNINIQMNYWPACSTNLDECMLPLIDFIRTLVKPGEKTAQSYFGARGWTASISANIFGF
TTPLESQDMSWNFNPMAGPWLATHVWEYYDYTKDLKFLKETGYELIKSSANFTVDYLWHKPDGTYTAAPSTSPEHGPIDQ
GATFVHAVVREILLDAIQASKELGIDKKERKQWEHVLANLVPYKIGRYGQLLEWSTDIDDPKDEHRHVNHLFGLHPGHTV
SPVTTPELAEAAKVVLVHRGDGATGWSMGWKLNQWARLQDGNHAYTLFGNLLKNGTVDNLWDTHPPFQIDGNFGGTAGIT
EMLLQSHMGFIQLLPALPDAWKDGSIYGICAKGNFEIDIAWKDGLLKEATILSKAGQNCIVKYAGQTISFKTVKGRSYQL
KYDKENGLIKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91795; Mature: 91795

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKHSLLFCALFTIFTGHAEDTDYTKGLSIWFDSPNTLQGKEVWHSSKQDASWESQSLP
CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCC
IGNGSIGANILGSIEAERITFNEKTLWRGGPNTAKGADYYWNVNKQSAHILDEIRKAFVE
CCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHC
GDQKKAEKLTRENFNSEVPYEFSREKPFRFGNFTTMGEFYVETGLSTIGMSDYKRILSLD
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHCCHHHHHHHHHHH
SAMAVVQFKKDDVAYQRNYFISYPANVMVMRFSADQPGKQNLTFRYAPNPVSTGQFSADG
CCEEEEEECCCCCEEECCEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEECCCC
NNGLVYTASLDNNGMKYAVRIQATVKGGTLNNTDGRITVKEADEVVFYVTADTDYKMNFA
CCCEEEEEEECCCCCEEEEEEEEEEECCEECCCCCEEEEEECCEEEEEEECCCCEEEECC
PDFTDPKTYVGVNPLETTQQWMKDAVSKGYSNLLDEHYKDYASLFNRVKLELNPTVKTSN
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEECCC
LPTAQRLKNYRNGQPDYYLEKLYYQFGRYLLIASSRPGNMPANLQGIWHNNIDGPWRVDY
CCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEE
HNNINIQMNYWPACSTNLDECMLPLIDFIRTLVKPGEKTAQSYFGARGWTASISANIFGF
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECEEEEE
TTPLESQDMSWNFNPMAGPWLATHVWEYYDYTKDLKFLKETGYELIKSSANFTVDYLWHK
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
PDGTYTAAPSTSPEHGPIDQGATFVHAVVREILLDAIQASKELGIDKKERKQWEHVLANL
CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VPYKIGRYGQLLEWSTDIDDPKDEHRHVNHLFGLHPGHTVSPVTTPELAEAAKVVLVHRG
HHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCHHHHCCEEEEEEECC
DGATGWSMGWKLNQWARLQDGNHAYTLFGNLLKNGTVDNLWDTHPPFQIDGNFGGTAGIT
CCCCCCCCCCCCCCCEEECCCCEEEEEHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHH
EMLLQSHMGFIQLLPALPDAWKDGSIYGICAKGNFEIDIAWKDGLLKEATILSKAGQNCI
HHHHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCCEE
VKYAGQTISFKTVKGRSYQLKYDKENGLIKIK
EEECCCEEEEEEECCCEEEEEEECCCCEEEEC
>Mature Secondary Structure
MRKKHSLLFCALFTIFTGHAEDTDYTKGLSIWFDSPNTLQGKEVWHSSKQDASWESQSLP
CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCC
IGNGSIGANILGSIEAERITFNEKTLWRGGPNTAKGADYYWNVNKQSAHILDEIRKAFVE
CCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHC
GDQKKAEKLTRENFNSEVPYEFSREKPFRFGNFTTMGEFYVETGLSTIGMSDYKRILSLD
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHCCHHHHHHHHHHH
SAMAVVQFKKDDVAYQRNYFISYPANVMVMRFSADQPGKQNLTFRYAPNPVSTGQFSADG
CCEEEEEECCCCCEEECCEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEECCCC
NNGLVYTASLDNNGMKYAVRIQATVKGGTLNNTDGRITVKEADEVVFYVTADTDYKMNFA
CCCEEEEEEECCCCCEEEEEEEEEEECCEECCCCCEEEEEECCEEEEEEECCCCEEEECC
PDFTDPKTYVGVNPLETTQQWMKDAVSKGYSNLLDEHYKDYASLFNRVKLELNPTVKTSN
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEECCC
LPTAQRLKNYRNGQPDYYLEKLYYQFGRYLLIASSRPGNMPANLQGIWHNNIDGPWRVDY
CCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEE
HNNINIQMNYWPACSTNLDECMLPLIDFIRTLVKPGEKTAQSYFGARGWTASISANIFGF
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECEEEEE
TTPLESQDMSWNFNPMAGPWLATHVWEYYDYTKDLKFLKETGYELIKSSANFTVDYLWHK
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
PDGTYTAAPSTSPEHGPIDQGATFVHAVVREILLDAIQASKELGIDKKERKQWEHVLANL
CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VPYKIGRYGQLLEWSTDIDDPKDEHRHVNHLFGLHPGHTVSPVTTPELAEAAKVVLVHRG
HHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCHHHHCCEEEEEEECC
DGATGWSMGWKLNQWARLQDGNHAYTLFGNLLKNGTVDNLWDTHPPFQIDGNFGGTAGIT
CCCCCCCCCCCCCCCEEECCCCEEEEEHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHH
EMLLQSHMGFIQLLPALPDAWKDGSIYGICAKGNFEIDIAWKDGLLKEATILSKAGQNCI
HHHHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCCEE
VKYAGQTISFKTVKGRSYQLKYDKENGLIKIK
EEECCCEEEEEEECCCEEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA