| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349977
Identifier: 29349977
GI number: 29349977
Start: 5990939
End: 5992024
Strand: Reverse
Name: 29349977
Synonym: BT_4569
Alternate gene names: NA
Gene position: 5992024-5990939 (Counterclockwise)
Preceding gene: 29349978
Following gene: 29349976
Centisome position: 95.71
GC content: 40.79
Gene sequence:
>1086_bases ATGAAAACCAACTATTTCTTAATAACCATGCTACTGTTACTTAGCATGACTTCTTGCAGCACCTATTATCGGATGACTTC ACGGGTTGAAAGGGACGGAAGTATGTACAGAGAAATCTATGCACAAGGTGATTCCGCTTTCATCGCAGGAGATAAGACAC ATAATCCATTTCTGTTTCAACCGAATGCCAACTGGCAATTAGTAAATCTAGACTCTACAATTAAATTCAACTTCTGGGGC GAAGAAGAAAAGCTGAATGTAAAAGCCTGCCAAAAACTCTCCGGAGTAGATGGAGAATACTTCACTGTTGACAAAGGTAA AGAGCATCTGAGTGCCATGGCTATACCTATGGAACGGGTAAAGAAGAGTTTCAGATGGTTCTATACCTATTATATATATA CCGCCACTTACAAAGAACTTCAGGACAAAGGTCCTGTACCTCTTGACAATTATCTGAATAAGGAAGAGCAAATGATTTGG CTTCATGGAAACGATGATGCCTTCAGAGGCATGAACGGCATCGAAATGAATGATAAACTGGATAAACTCGAAGCTAAATT CGGAGAATGGTATAACCGCAATGTCTATGAGATCAATTGGGAAGTCATCCGCCACTTCACTTCTTTACAAGGAGATACCG CTTGCCTGCAGTGTCTGGAGGAATTGAAAGATTCTGTCTACAAGAAACATTCGTCAGAAAAAGGCGACAGTATGGGAGAC GCTGATATCGAGGAGGTCTGCGGTATGTTTGATAAAGCTTGCAGTACGAAATACTTTTCGGACCTTTATAAAACAAATAA AGAAATGATGGATGCCCTGTGCGAAGAGAAAATCAACATCGCCGAAGTCTTCTATCATGCTATACAATTTGAGTTGACAC TGCCGGGCAGACTGCTCACCTCTAACGCCAAAGTTCTGAAAGATAATGTAGTCATTTGGAAAATAGACGGCTTCCGGCTT CTCGCTGGTGATTATATACTTACCGCAGAGTCACGGGTCATTAATTACTGGGCATTCGGGATTACTTTATTCATGATGCT GTTTGTCTTAGGAATTTTCATCAAATTATACAGGAGGAGATCATAA
Upstream 100 bases:
>100_bases AAGAATACTTATCTATCCTCTCAATATATACAACACCGGAAATCCCGGAAGATGCAAATCTTACAAGTCATCAAAAAAAA ACGATTAAAATAGACAGAAT
Downstream 100 bases:
>100_bases AAGCAGTAACAAATAGCATCGTCGTTTTCAGACTCTTGCAGCAGTCCTCAACCGGATGATTGATAATCATACTGTATAGC AGATAAGCCTTTTCGTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQPNANWQLVNLDSTIKFNFWG EEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERVKKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIW LHGNDDAFRGMNGIEMNDKLDKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLTSNAKVLKDNVVIWKIDGFRL LAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRRS
Sequences:
>Translated_361_residues MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQPNANWQLVNLDSTIKFNFWG EEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERVKKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIW LHGNDDAFRGMNGIEMNDKLDKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLTSNAKVLKDNVVIWKIDGFRL LAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRRS >Mature_361_residues MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQPNANWQLVNLDSTIKFNFWG EEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERVKKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIW LHGNDDAFRGMNGIEMNDKLDKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLTSNAKVLKDNVVIWKIDGFRL LAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42185; Mature: 42185
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEC PNANWQLVNLDSTIKFNFWGEEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERV CCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHCCHHHH KKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIWLHGNDDAFRGMNGIEMNDKL HHHHHEEEEEEEEEHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCHHHCCCCCCCCCHHH DKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD HHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCEEC SNAKVLKDNVVIWKIDGFRLLAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRR CCCEEEECCEEEEEECCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC S C >Mature Secondary Structure MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEC PNANWQLVNLDSTIKFNFWGEEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERV CCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHCCHHHH KKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIWLHGNDDAFRGMNGIEMNDKL HHHHHEEEEEEEEEHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCHHHCCCCCCCCCHHH DKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD HHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCEEC SNAKVLKDNVVIWKIDGFRLLAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRR CCCEEEECCEEEEEECCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA