Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349977

Identifier: 29349977

GI number: 29349977

Start: 5990939

End: 5992024

Strand: Reverse

Name: 29349977

Synonym: BT_4569

Alternate gene names: NA

Gene position: 5992024-5990939 (Counterclockwise)

Preceding gene: 29349978

Following gene: 29349976

Centisome position: 95.71

GC content: 40.79

Gene sequence:

>1086_bases
ATGAAAACCAACTATTTCTTAATAACCATGCTACTGTTACTTAGCATGACTTCTTGCAGCACCTATTATCGGATGACTTC
ACGGGTTGAAAGGGACGGAAGTATGTACAGAGAAATCTATGCACAAGGTGATTCCGCTTTCATCGCAGGAGATAAGACAC
ATAATCCATTTCTGTTTCAACCGAATGCCAACTGGCAATTAGTAAATCTAGACTCTACAATTAAATTCAACTTCTGGGGC
GAAGAAGAAAAGCTGAATGTAAAAGCCTGCCAAAAACTCTCCGGAGTAGATGGAGAATACTTCACTGTTGACAAAGGTAA
AGAGCATCTGAGTGCCATGGCTATACCTATGGAACGGGTAAAGAAGAGTTTCAGATGGTTCTATACCTATTATATATATA
CCGCCACTTACAAAGAACTTCAGGACAAAGGTCCTGTACCTCTTGACAATTATCTGAATAAGGAAGAGCAAATGATTTGG
CTTCATGGAAACGATGATGCCTTCAGAGGCATGAACGGCATCGAAATGAATGATAAACTGGATAAACTCGAAGCTAAATT
CGGAGAATGGTATAACCGCAATGTCTATGAGATCAATTGGGAAGTCATCCGCCACTTCACTTCTTTACAAGGAGATACCG
CTTGCCTGCAGTGTCTGGAGGAATTGAAAGATTCTGTCTACAAGAAACATTCGTCAGAAAAAGGCGACAGTATGGGAGAC
GCTGATATCGAGGAGGTCTGCGGTATGTTTGATAAAGCTTGCAGTACGAAATACTTTTCGGACCTTTATAAAACAAATAA
AGAAATGATGGATGCCCTGTGCGAAGAGAAAATCAACATCGCCGAAGTCTTCTATCATGCTATACAATTTGAGTTGACAC
TGCCGGGCAGACTGCTCACCTCTAACGCCAAAGTTCTGAAAGATAATGTAGTCATTTGGAAAATAGACGGCTTCCGGCTT
CTCGCTGGTGATTATATACTTACCGCAGAGTCACGGGTCATTAATTACTGGGCATTCGGGATTACTTTATTCATGATGCT
GTTTGTCTTAGGAATTTTCATCAAATTATACAGGAGGAGATCATAA

Upstream 100 bases:

>100_bases
AAGAATACTTATCTATCCTCTCAATATATACAACACCGGAAATCCCGGAAGATGCAAATCTTACAAGTCATCAAAAAAAA
ACGATTAAAATAGACAGAAT

Downstream 100 bases:

>100_bases
AAGCAGTAACAAATAGCATCGTCGTTTTCAGACTCTTGCAGCAGTCCTCAACCGGATGATTGATAATCATACTGTATAGC
AGATAAGCCTTTTCGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQPNANWQLVNLDSTIKFNFWG
EEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERVKKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIW
LHGNDDAFRGMNGIEMNDKLDKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD
ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLTSNAKVLKDNVVIWKIDGFRL
LAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRRS

Sequences:

>Translated_361_residues
MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQPNANWQLVNLDSTIKFNFWG
EEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERVKKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIW
LHGNDDAFRGMNGIEMNDKLDKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD
ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLTSNAKVLKDNVVIWKIDGFRL
LAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRRS
>Mature_361_residues
MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQPNANWQLVNLDSTIKFNFWG
EEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERVKKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIW
LHGNDDAFRGMNGIEMNDKLDKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD
ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLTSNAKVLKDNVVIWKIDGFRL
LAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42185; Mature: 42185

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEC
PNANWQLVNLDSTIKFNFWGEEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERV
CCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHCCHHHH
KKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIWLHGNDDAFRGMNGIEMNDKL
HHHHHEEEEEEEEEHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCHHHCCCCCCCCCHHH
DKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD
HHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLT
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCEEC
SNAKVLKDNVVIWKIDGFRLLAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRR
CCCEEEECCEEEEEECCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
S
C
>Mature Secondary Structure
MKTNYFLITMLLLLSMTSCSTYYRMTSRVERDGSMYREIYAQGDSAFIAGDKTHNPFLFQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEC
PNANWQLVNLDSTIKFNFWGEEEKLNVKACQKLSGVDGEYFTVDKGKEHLSAMAIPMERV
CCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHCCHHHH
KKSFRWFYTYYIYTATYKELQDKGPVPLDNYLNKEEQMIWLHGNDDAFRGMNGIEMNDKL
HHHHHEEEEEEEEEHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCHHHCCCCCCCCCHHH
DKLEAKFGEWYNRNVYEINWEVIRHFTSLQGDTACLQCLEELKDSVYKKHSSEKGDSMGD
HHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ADIEEVCGMFDKACSTKYFSDLYKTNKEMMDALCEEKINIAEVFYHAIQFELTLPGRLLT
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCEEC
SNAKVLKDNVVIWKIDGFRLLAGDYILTAESRVINYWAFGITLFMMLFVLGIFIKLYRRR
CCCEEEECCEEEEEECCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA