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The map label for this gene is 29349306

Identifier: 29349306

GI number: 29349306

Start: 5069671

End: 5071500

Strand: Reverse

Name: 29349306

Synonym: BT_3898

Alternate gene names: NA

Gene position: 5071500-5069671 (Counterclockwise)

Preceding gene: 29349307

Following gene: 29349305

Centisome position: 81.01

GC content: 45.3

Gene sequence:

>1830_bases
ATGACTCCGGAACTTGCCTATTTCTTAAAGATAAACGTAGCCATCGCATTGTTCTACGCTTTCTATCGGTTGTTTTTTCA
TAAAGACACCTTCTTCCACTGGCGACGGACCGCTCTGTTATGCTTCTTTGGCATCTCTCTGCTCTATCCCTTACTGAATA
TTCAAGAGTGGATAAAGGAGCAGGAGCCGATGGTGGCAATGGCAGATCTTTATGCTACGATCATACTTCCGGAGCAAATC
ATCGAGGCACCACAGGAAACAACGGCCAACTGGCAGGAGCTAATCCCACAAATTCTGGGATTTATCTACTGGACCGGTGT
ATTACTTCTTGCCCTACGCTTCCTGATCCAGCTGGGCAGTATCATACGATTGCATTTCCTATGCCCGAAAAGCACGATAC
AAGGATCACGTGTACACATATTAAAGAAAGGTACAGGCCCCTTTTCCTTCTTCCACTGGATATTCATACATCCGGAATCG
CATACAGAATCCGAGATCAGCGAAATAATCACGCATGAAGAGACTCATGCCCGCCAATATCACTCAGCAGATGTACTCGT
CAGCGAGATTATGTGTACTTTCTGCTGGTTCAATCCCTTCGTCTGGCTGATGAAACGGGAAGTCAGAGGTAATCTGGAAT
ACATGGCAGATCACCGGGTATTAGAGACGGGACATGATAGTAAATCATACCAGTACCACTTGCTGGGACTGGCACATCAC
AAGGCTGCAGCAAATTTATCTAATAGTTTCAATGTTTTACCACTTAAAAATCGTATCAAAATGATGAATAAACGAAGAAC
CAAAGAAATAGGAAGGACTAAATATCTGATGTTCCTTCCCTTGGCTGCCCTGTTGATGATTATCAGCAACATCGAAGTAG
TAGCTCGTACAACGAAAGAATTTGCCAAAGAAATGATGGCAGCACCGGAAGAACAAGGTGTTTCGCAAACCGAACTCGCC
AATGGTCCGGAACTTCCCGATGGAATGACGGGAGTAGCGACATTACAGGATAAAAAAGGAATGCAGAAAACAAAAGAGGT
AGCTCCTCCTCCCCCTCCGGCACCCGTTAAAAGTGCTACTGTAAATGATTCTGTCGTATTTGAAGTTGTAGAAGAAATGC
CCGACTTCCCCGGTGGACAATCAGCATTGATGGAATATCTCGCCAAGAACATCAAATATCCGGCAACAGCTCATGAAAAT
GGAAAGCAAGGACGTGTGATTGTGATGTTCGTAGTCAAAAAAGACGGTAGTATTTCCGACGTTAAAACAGTTCGAGGCGT
AGACCCCTATCTTGACAAGGAAGCTGAACGAGTGATTGCTGCCATGCCTAATTGGAAACCCGGCAAGCAAAGAGGACAAG
CTGTGAACGTAAGATTTACGGTTCCCGTAACTTTCCGTCTGTCCGGTCCGGAACCTGCAAAACCGGCAGAAACACCCGAA
GCAGTAGCAATAGAAAAGTTTGAAGAGGTCGTAGTGGTGGGCTATGGTCCTAAAGAAGCCACACCCAATAATGAACCAAC
TTTCAAAGTCGTAGACGAGATGCCTAAATTTCCCGGAGGACAGGAGGGATTAATGCGCTACTTAGCCAAAAATATAAAAT
ATCCGACTATGGCCCAGCAGAATAAGGAACAAGGAAAAGTGCTGGTCCAGATTGTCATCGGAAAAGACGGTAACGTGTCG
AATATAAAAATATTAGAAGGCGCGTCGGCATGGTTGGACGCTGAAGCGATTCGTGTAGTGCGGGGTATGCCTAAGTGGGA
ACCGGGAAAACAGAACGGACAAGCCGTTGCCGTAGAATATACATTCCCTATTACATTCCGACTTCAATAA

Upstream 100 bases:

>100_bases
CTTTCTTTGCAAAGGACCAGAAGATATCTACGGATGACCTTAAGGACATTATCGAACTGATAGAGAAAGGAAAAGAAAAA
TAAACTGAAACTTTATCGAT

Downstream 100 bases:

>100_bases
GCAAAACCGAAAATATCATTATTCCCCTAACAAGTAAATAACAGAAAAAAGGAGCAATCGTAAACGATTCTGCTCCTTTT
TCTGTTTTCGCATAGATAAT

Product: TonB

Products: NA

Alternate protein names: NB Protein; Peptidase; Conserved Transporter; Outer Membrane Protein nB; Nb Family Protein; NB-Dependent Receptor; BlaR1 Peptidase; Outer Membrane Transport Energization Protein nb; BlaR1 Peptidase M; Peptidase M; Transcriptional Regulator; NB-Related Protein; NB Family C-Terminal Domain Protein; Cytochrome C Biogenesis; Outer Membrane Protein; NB Family Outer Membrane Receptor Protein; Antirepressor; LOW QUALITY PROTEIN Outer Membrane Protein; Protein nB

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MTPELAYFLKINVAIALFYAFYRLFFHKDTFFHWRRTALLCFFGISLLYPLLNIQEWIKEQEPMVAMADLYATIILPEQI
IEAPQETTANWQELIPQILGFIYWTGVLLLALRFLIQLGSIIRLHFLCPKSTIQGSRVHILKKGTGPFSFFHWIFIHPES
HTESEISEIITHEETHARQYHSADVLVSEIMCTFCWFNPFVWLMKREVRGNLEYMADHRVLETGHDSKSYQYHLLGLAHH
KAAANLSNSFNVLPLKNRIKMMNKRRTKEIGRTKYLMFLPLAALLMIISNIEVVARTTKEFAKEMMAAPEEQGVSQTELA
NGPELPDGMTGVATLQDKKGMQKTKEVAPPPPPAPVKSATVNDSVVFEVVEEMPDFPGGQSALMEYLAKNIKYPATAHEN
GKQGRVIVMFVVKKDGSISDVKTVRGVDPYLDKEAERVIAAMPNWKPGKQRGQAVNVRFTVPVTFRLSGPEPAKPAETPE
AVAIEKFEEVVVVGYGPKEATPNNEPTFKVVDEMPKFPGGQEGLMRYLAKNIKYPTMAQQNKEQGKVLVQIVIGKDGNVS
NIKILEGASAWLDAEAIRVVRGMPKWEPGKQNGQAVAVEYTFPITFRLQ

Sequences:

>Translated_609_residues
MTPELAYFLKINVAIALFYAFYRLFFHKDTFFHWRRTALLCFFGISLLYPLLNIQEWIKEQEPMVAMADLYATIILPEQI
IEAPQETTANWQELIPQILGFIYWTGVLLLALRFLIQLGSIIRLHFLCPKSTIQGSRVHILKKGTGPFSFFHWIFIHPES
HTESEISEIITHEETHARQYHSADVLVSEIMCTFCWFNPFVWLMKREVRGNLEYMADHRVLETGHDSKSYQYHLLGLAHH
KAAANLSNSFNVLPLKNRIKMMNKRRTKEIGRTKYLMFLPLAALLMIISNIEVVARTTKEFAKEMMAAPEEQGVSQTELA
NGPELPDGMTGVATLQDKKGMQKTKEVAPPPPPAPVKSATVNDSVVFEVVEEMPDFPGGQSALMEYLAKNIKYPATAHEN
GKQGRVIVMFVVKKDGSISDVKTVRGVDPYLDKEAERVIAAMPNWKPGKQRGQAVNVRFTVPVTFRLSGPEPAKPAETPE
AVAIEKFEEVVVVGYGPKEATPNNEPTFKVVDEMPKFPGGQEGLMRYLAKNIKYPTMAQQNKEQGKVLVQIVIGKDGNVS
NIKILEGASAWLDAEAIRVVRGMPKWEPGKQNGQAVAVEYTFPITFRLQ
>Mature_608_residues
TPELAYFLKINVAIALFYAFYRLFFHKDTFFHWRRTALLCFFGISLLYPLLNIQEWIKEQEPMVAMADLYATIILPEQII
EAPQETTANWQELIPQILGFIYWTGVLLLALRFLIQLGSIIRLHFLCPKSTIQGSRVHILKKGTGPFSFFHWIFIHPESH
TESEISEIITHEETHARQYHSADVLVSEIMCTFCWFNPFVWLMKREVRGNLEYMADHRVLETGHDSKSYQYHLLGLAHHK
AAANLSNSFNVLPLKNRIKMMNKRRTKEIGRTKYLMFLPLAALLMIISNIEVVARTTKEFAKEMMAAPEEQGVSQTELAN
GPELPDGMTGVATLQDKKGMQKTKEVAPPPPPAPVKSATVNDSVVFEVVEEMPDFPGGQSALMEYLAKNIKYPATAHENG
KQGRVIVMFVVKKDGSISDVKTVRGVDPYLDKEAERVIAAMPNWKPGKQRGQAVNVRFTVPVTFRLSGPEPAKPAETPEA
VAIEKFEEVVVVGYGPKEATPNNEPTFKVVDEMPKFPGGQEGLMRYLAKNIKYPTMAQQNKEQGKVLVQIVIGKDGNVSN
IKILEGASAWLDAEAIRVVRGMPKWEPGKQNGQAVAVEYTFPITFRLQ

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68804; Mature: 68673

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPELAYFLKINVAIALFYAFYRLFFHKDTFFHWRRTALLCFFGISLLYPLLNIQEWIKE
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEPMVAMADLYATIILPEQIIEAPQETTANWQELIPQILGFIYWTGVLLLALRFLIQLGS
CCCCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRLHFLCPKSTIQGSRVHILKKGTGPFSFFHWIFIHPESHTESEISEIITHEETHARQY
HHEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHH
HSADVLVSEIMCTFCWFNPFVWLMKREVRGNLEYMADHRVLETGHDSKSYQYHLLGLAHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCCEEEEEEEEHHH
KAAANLSNSFNVLPLKNRIKMMNKRRTKEIGRTKYLMFLPLAALLMIISNIEVVARTTKE
HHHHCCCCCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
FAKEMMAAPEEQGVSQTELANGPELPDGMTGVATLQDKKGMQKTKEVAPPPPPAPVKSAT
HHHHHHCCCHHCCCCHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCC
VNDSVVFEVVEEMPDFPGGQSALMEYLAKNIKYPATAHENGKQGRVIVMFVVKKDGSISD
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCHHH
VKTVRGVDPYLDKEAERVIAAMPNWKPGKQRGQAVNVRFTVPVTFRLSGPEPAKPAETPE
HHHHCCCCCHHCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCC
AVAIEKFEEVVVVGYGPKEATPNNEPTFKVVDEMPKFPGGQEGLMRYLAKNIKYPTMAQQ
HHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHC
NKEQGKVLVQIVIGKDGNVSNIKILEGASAWLDAEAIRVVRGMPKWEPGKQNGQAVAVEY
CCCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
TFPITFRLQ
EEEEEEEEC
>Mature Secondary Structure 
TPELAYFLKINVAIALFYAFYRLFFHKDTFFHWRRTALLCFFGISLLYPLLNIQEWIKE
CCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEPMVAMADLYATIILPEQIIEAPQETTANWQELIPQILGFIYWTGVLLLALRFLIQLGS
CCCCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRLHFLCPKSTIQGSRVHILKKGTGPFSFFHWIFIHPESHTESEISEIITHEETHARQY
HHEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHH
HSADVLVSEIMCTFCWFNPFVWLMKREVRGNLEYMADHRVLETGHDSKSYQYHLLGLAHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCCEEEEEEEEHHH
KAAANLSNSFNVLPLKNRIKMMNKRRTKEIGRTKYLMFLPLAALLMIISNIEVVARTTKE
HHHHCCCCCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
FAKEMMAAPEEQGVSQTELANGPELPDGMTGVATLQDKKGMQKTKEVAPPPPPAPVKSAT
HHHHHHCCCHHCCCCHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCC
VNDSVVFEVVEEMPDFPGGQSALMEYLAKNIKYPATAHENGKQGRVIVMFVVKKDGSISD
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCHHH
VKTVRGVDPYLDKEAERVIAAMPNWKPGKQRGQAVNVRFTVPVTFRLSGPEPAKPAETPE
HHHHCCCCCHHCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCC
AVAIEKFEEVVVVGYGPKEATPNNEPTFKVVDEMPKFPGGQEGLMRYLAKNIKYPTMAQQ
HHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHC
NKEQGKVLVQIVIGKDGNVSNIKILEGASAWLDAEAIRVVRGMPKWEPGKQNGQAVAVEY
CCCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
TFPITFRLQ
EEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA