| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349305
Identifier: 29349305
GI number: 29349305
Start: 5067604
End: 5069508
Strand: Reverse
Name: 29349305
Synonym: BT_3897
Alternate gene names: NA
Gene position: 5069508-5067604 (Counterclockwise)
Preceding gene: 29349306
Following gene: 29349304
Centisome position: 80.98
GC content: 42.36
Gene sequence:
>1905_bases ATGATAAGTTTGCTGCTAAGCATACTTTGTATGACACAAGCTAAAGACAGAATCGTAGAACGTCCTCCCTTTTTAGCTCA GAGTTCCTCAAGTATAGAGATAGACAAAATTGTCATGAGTGACACAGTCACCACTGTGTATATCAAAGCTTTCTATCGGC CCAAATACTGGATAAAGATCGCAACCGGCAGTGTACTGAAAGACAACAATGGCAACCTATACCCTGTCCGGAAGGGAATC GGCATTACACTGGACAAAGAGTTCTGGATGCCCGAATCCGGCGAAGCCGAATTCCAATTAACTTTCCCACCCATTCCTCA AAACGTGACTTGCCTGGATTTCTCTGAAGGAGACTTTGAGGGAGCATATAAGATATGGGGCATACAGCTGGACAAGAAAA CATTCAGCAAGTTCAAACTGCCTAAAGACGTTACAGTCACCAAAGCAGACCATAAAACGACGCTGCCCGAACCAGTCGTT AAATACGCCAAAGCAATTCTCAAAGGAAGAATCCTTGACTACCAAAAAGGGATGCCCAACAAAGGCAGTCTTTATTTTCA AGATGTAATAAGAGACGAAGCTCAGGAAGGAAAAATCCGCATCCAGGATGACGGAACGTTTTATCATGAGATGAATGTCT TCATGGTCACCCCATGCATGATCAGGTTTCCTTTTGGAGCTGTCAGCTACTTATTAGCACCGGGAGAAACCACTTCGGTC GTTATCAATCTTCGCGAAAATGCCCGCAAGCAGTCACATCTCCGCCAAGCAGAAAAGCCATACGGAAAAGAAATCTATTA CGGAGGTTATTTAGCCGGAGTACAGCAAGAGCTGGCTGATCATCCTATGAGTTTCAGTTTCACTGAAGGTAATAGTTATG AAGAATACCAACAACAGATTAAAAAGCTGAATGGTAAAACAGCTGAAGAATATAAAGCTCAAATACTTGCCCGACTCCCT GAGTTCAGAAAACAAATCACACAGTCGAAAGGAAGCCCTGCATATAAGGAGATTATTAATACAGACCTCGAATTGTCTGC CGCACTAAAGATTATCGAAACTGAAAGGAACTTGAAATTAGTTCATATCATGACGAATGGGCTGGAAGGAGAAAAAGCAA ATAAATACTATGCCGAGACTAAGATTGATATTCCGCAAGGATATTATGAAAGTCTTCAGGACTTCACGTATATCCTTTCA CCTAAAGCCTGTTACAACAGCAGATACCCGATACTGTTTGACATCATACGCCGTATAGGTATAGATGATAAGATTCTTAA GAGTCTGAGCAATCATACAGCTGCCAGTTACTTAATACAAAATCTGAAGGCACAGATGATTGGAGTCTCCATGAGAGATC TCAATCCACTTAACGATAAGCAAAAGGCAGAACTGTCAACGATGCCCGCAGCATACAACGACATGGCTCTGGCTATGAAC AACGACCTGCTGAAACAAATAGAAATCAACAAGAAGAAAACAGGATTCACCGTTAATGAGACAGGAGAAGTTTCGAATGA AGATTTATTCCCCTCCATTATCTCCAAATTCCGGGGACATACGCTGTTAGTTGATTTTTGGGCAACATGGTGTGGTCCAT GCCGGTCTGCCAACAAACAGATTCTCCCGATGAAAGAAGAACTGAAAGACAAAGACATTATCTACCTTTACATCACAGGT GAAACGTCTCCACTGGGAACCTGGAAAAACATGATTCCTGACATTCACGGAGAACATTTCCGTGTGACGGATGAACAGTG GAGCTATCTGCGTGAGAAGTTCAGTATCCGGGGCGTTCCTACTTACTTTGTTATTGACAAAGAAGGAAACATCACTTATA AACAAACCGGATTCCCCGGAGTGGACACCATGAAAGAACAATTGATGAAAGCATTGGAAAAGTAA
Upstream 100 bases:
>100_bases AACGATTCTGCTCCTTTTTCTGTTTTCGCATAGATAATTACAATAATATGATTACATTTGTTGGAGATAAAAGCCTAATC GTATGAAAAGATTCGCATTA
Downstream 100 bases:
>100_bases GATCATCTAATCAAAGAGTAACAATTAACTAAAAAGCATACAACAAAATGAAACACCAACAACTATCAAGAGCGAACGGA ACGAAACGTCCTTTCCTCTT
Product: putative thiol:disulfide interchange protein DsbE
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MISLLLSILCMTQAKDRIVERPPFLAQSSSSIEIDKIVMSDTVTTVYIKAFYRPKYWIKIATGSVLKDNNGNLYPVRKGI GITLDKEFWMPESGEAEFQLTFPPIPQNVTCLDFSEGDFEGAYKIWGIQLDKKTFSKFKLPKDVTVTKADHKTTLPEPVV KYAKAILKGRILDYQKGMPNKGSLYFQDVIRDEAQEGKIRIQDDGTFYHEMNVFMVTPCMIRFPFGAVSYLLAPGETTSV VINLRENARKQSHLRQAEKPYGKEIYYGGYLAGVQQELADHPMSFSFTEGNSYEEYQQQIKKLNGKTAEEYKAQILARLP EFRKQITQSKGSPAYKEIINTDLELSAALKIIETERNLKLVHIMTNGLEGEKANKYYAETKIDIPQGYYESLQDFTYILS PKACYNSRYPILFDIIRRIGIDDKILKSLSNHTAASYLIQNLKAQMIGVSMRDLNPLNDKQKAELSTMPAAYNDMALAMN NDLLKQIEINKKKTGFTVNETGEVSNEDLFPSIISKFRGHTLLVDFWATWCGPCRSANKQILPMKEELKDKDIIYLYITG ETSPLGTWKNMIPDIHGEHFRVTDEQWSYLREKFSIRGVPTYFVIDKEGNITYKQTGFPGVDTMKEQLMKALEK
Sequences:
>Translated_634_residues MISLLLSILCMTQAKDRIVERPPFLAQSSSSIEIDKIVMSDTVTTVYIKAFYRPKYWIKIATGSVLKDNNGNLYPVRKGI GITLDKEFWMPESGEAEFQLTFPPIPQNVTCLDFSEGDFEGAYKIWGIQLDKKTFSKFKLPKDVTVTKADHKTTLPEPVV KYAKAILKGRILDYQKGMPNKGSLYFQDVIRDEAQEGKIRIQDDGTFYHEMNVFMVTPCMIRFPFGAVSYLLAPGETTSV VINLRENARKQSHLRQAEKPYGKEIYYGGYLAGVQQELADHPMSFSFTEGNSYEEYQQQIKKLNGKTAEEYKAQILARLP EFRKQITQSKGSPAYKEIINTDLELSAALKIIETERNLKLVHIMTNGLEGEKANKYYAETKIDIPQGYYESLQDFTYILS PKACYNSRYPILFDIIRRIGIDDKILKSLSNHTAASYLIQNLKAQMIGVSMRDLNPLNDKQKAELSTMPAAYNDMALAMN NDLLKQIEINKKKTGFTVNETGEVSNEDLFPSIISKFRGHTLLVDFWATWCGPCRSANKQILPMKEELKDKDIIYLYITG ETSPLGTWKNMIPDIHGEHFRVTDEQWSYLREKFSIRGVPTYFVIDKEGNITYKQTGFPGVDTMKEQLMKALEK >Mature_634_residues MISLLLSILCMTQAKDRIVERPPFLAQSSSSIEIDKIVMSDTVTTVYIKAFYRPKYWIKIATGSVLKDNNGNLYPVRKGI GITLDKEFWMPESGEAEFQLTFPPIPQNVTCLDFSEGDFEGAYKIWGIQLDKKTFSKFKLPKDVTVTKADHKTTLPEPVV KYAKAILKGRILDYQKGMPNKGSLYFQDVIRDEAQEGKIRIQDDGTFYHEMNVFMVTPCMIRFPFGAVSYLLAPGETTSV VINLRENARKQSHLRQAEKPYGKEIYYGGYLAGVQQELADHPMSFSFTEGNSYEEYQQQIKKLNGKTAEEYKAQILARLP EFRKQITQSKGSPAYKEIINTDLELSAALKIIETERNLKLVHIMTNGLEGEKANKYYAETKIDIPQGYYESLQDFTYILS PKACYNSRYPILFDIIRRIGIDDKILKSLSNHTAASYLIQNLKAQMIGVSMRDLNPLNDKQKAELSTMPAAYNDMALAMN NDLLKQIEINKKKTGFTVNETGEVSNEDLFPSIISKFRGHTLLVDFWATWCGPCRSANKQILPMKEELKDKDIIYLYITG ETSPLGTWKNMIPDIHGEHFRVTDEQWSYLREKFSIRGVPTYFVIDKEGNITYKQTGFPGVDTMKEQLMKALEK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72466; Mature: 72466
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLLLSILCMTQAKDRIVERPPFLAQSSSSIEIDKIVMSDTVTTVYIKAFYRPKYWIKI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCEEEEEE ATGSVLKDNNGNLYPVRKGIGITLDKEFWMPESGEAEFQLTFPPIPQNVTCLDFSEGDFE ECCCEEECCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCC GAYKIWGIQLDKKTFSKFKLPKDVTVTKADHKTTLPEPVVKYAKAILKGRILDYQKGMPN CEEEEEEEEECHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCC KGSLYFQDVIRDEAQEGKIRIQDDGTFYHEMNVFMVTPCMIRFPFGAVSYLLAPGETTSV CCCEEHHHHHHCCHHCCCEEEEECCEEEEEEEEEEECCHHEECCCHHHHHEECCCCCEEE VINLRENARKQSHLRQAEKPYGKEIYYGGYLAGVQQELADHPMSFSFTEGNSYEEYQQQI EEEEHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH KKLNGKTAEEYKAQILARLPEFRKQITQSKGSPAYKEIINTDLELSAALKIIETERNLKL HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHEEEECCCCEEE VHIMTNGLEGEKANKYYAETKIDIPQGYYESLQDFTYILSPKACYNSRYPILFDIIRRIG EEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHEEEECCHHHCCCCCCHHHHHHHHCC IDDKILKSLSNHTAASYLIQNLKAQMIGVSMRDLNPLNDKQKAELSTMPAAYNDMALAMN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHCCCCCCCEEEEEC NDLLKQIEINKKKTGFTVNETGEVSNEDLFPSIISKFRGHTLLVDFWATWCGPCRSANKQ CHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCEEEEEHHHHHCHHHHCCCCC ILPMKEELKDKDIIYLYITGETSPLGTWKNMIPDIHGEHFRVTDEQWSYLREKFSIRGVP CCCCHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCEEECHHHHHHHHHHHCCCCCC TYFVIDKEGNITYKQTGFPGVDTMKEQLMKALEK EEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MISLLLSILCMTQAKDRIVERPPFLAQSSSSIEIDKIVMSDTVTTVYIKAFYRPKYWIKI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCEEEEEE ATGSVLKDNNGNLYPVRKGIGITLDKEFWMPESGEAEFQLTFPPIPQNVTCLDFSEGDFE ECCCEEECCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCC GAYKIWGIQLDKKTFSKFKLPKDVTVTKADHKTTLPEPVVKYAKAILKGRILDYQKGMPN CEEEEEEEEECHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCC KGSLYFQDVIRDEAQEGKIRIQDDGTFYHEMNVFMVTPCMIRFPFGAVSYLLAPGETTSV CCCEEHHHHHHCCHHCCCEEEEECCEEEEEEEEEEECCHHEECCCHHHHHEECCCCCEEE VINLRENARKQSHLRQAEKPYGKEIYYGGYLAGVQQELADHPMSFSFTEGNSYEEYQQQI EEEEHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH KKLNGKTAEEYKAQILARLPEFRKQITQSKGSPAYKEIINTDLELSAALKIIETERNLKL HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHEEEECCCCEEE VHIMTNGLEGEKANKYYAETKIDIPQGYYESLQDFTYILSPKACYNSRYPILFDIIRRIG EEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHEEEECCHHHCCCCCCHHHHHHHHCC IDDKILKSLSNHTAASYLIQNLKAQMIGVSMRDLNPLNDKQKAELSTMPAAYNDMALAMN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHCCCCCCCEEEEEC NDLLKQIEINKKKTGFTVNETGEVSNEDLFPSIISKFRGHTLLVDFWATWCGPCRSANKQ CHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCEEEEEHHHHHCHHHHCCCCC ILPMKEELKDKDIIYLYITGETSPLGTWKNMIPDIHGEHFRVTDEQWSYLREKFSIRGVP CCCCHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCEEECHHHHHHHHHHHCCCCCC TYFVIDKEGNITYKQTGFPGVDTMKEQLMKALEK EEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA