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The map label for this gene is yciH [C]

Identifier: 29349287

GI number: 29349287

Start: 5051985

End: 5052335

Strand: Reverse

Name: yciH [C]

Synonym: BT_3879

Alternate gene names: 29349287

Gene position: 5052335-5051985 (Counterclockwise)

Preceding gene: 29349294

Following gene: 29349276

Centisome position: 80.7

GC content: 42.74

Gene sequence:

>351_bases
ATGAAAAATAATGATTGGAAAGATAGATTGAACGTGGTCTACTCTACAAATCCTGATTTCAACTATGACATGGATGACGA
TCAGGAACAAGTGACGCTGGACAAGAGCAAACAGAACCTTCGGGTTTCTCTCGACCGAAAAAACCGTGGCGGCAAAGTAG
TTACACTCATCACCGGATTCGTTGGAACAGAGAATGACCAAAAAGAACTCGGAAAAATGCTAAAAAGTAAATGCGGAGTC
GGAGGTTCGGCCAAAGACGGAGAAATCATCGTACAGGGAGATTTCAAGCAGAAAGTGATAGACCTGCTGATAAAAGAAGG
ATATACAAAGACCAAAGGGGTCGGAGGATAA

Upstream 100 bases:

>100_bases
TATTAGTCTTATTTCGTTTTATTATTAGACGCCAAAGTAAACAAAAGATTGCAAAGTTCCCCACAAAATATTACTTTTGA
CACAATAAAAGTTGAAGTAT

Downstream 100 bases:

>100_bases
TAAAAAAGGGCGGAAACCATCAAAGTTCCGCCCTTCTCTATTATCTTTTTGAGATAAATTATTCAGCTTTCAGAGTGAAG
CGCTTAAAGTCAAGAACCTT

Product: putative translation initiation factor SUI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKNNDWKDRLNVVYSTNPDFNYDMDDDQEQVTLDKSKQNLRVSLDRKNRGGKVVTLITGFVGTENDQKELGKMLKSKCGV
GGSAKDGEIIVQGDFKQKVIDLLIKEGYTKTKGVGG

Sequences:

>Translated_116_residues
MKNNDWKDRLNVVYSTNPDFNYDMDDDQEQVTLDKSKQNLRVSLDRKNRGGKVVTLITGFVGTENDQKELGKMLKSKCGV
GGSAKDGEIIVQGDFKQKVIDLLIKEGYTKTKGVGG
>Mature_116_residues
MKNNDWKDRLNVVYSTNPDFNYDMDDDQEQVTLDKSKQNLRVSLDRKNRGGKVVTLITGFVGTENDQKELGKMLKSKCGV
GGSAKDGEIIVQGDFKQKVIDLLIKEGYTKTKGVGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12916; Mature: 12916

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNDWKDRLNVVYSTNPDFNYDMDDDQEQVTLDKSKQNLRVSLDRKNRGGKVVTLITGF
CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEEEC
VGTENDQKELGKMLKSKCGVGGSAKDGEIIVQGDFKQKVIDLLIKEGYTKTKGVGG
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKNNDWKDRLNVVYSTNPDFNYDMDDDQEQVTLDKSKQNLRVSLDRKNRGGKVVTLITGF
CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEEEC
VGTENDQKELGKMLKSKCGVGGSAKDGEIIVQGDFKQKVIDLLIKEGYTKTKGVGG
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]