| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349192
Identifier: 29349192
GI number: 29349192
Start: 4910414
End: 4912696
Strand: Reverse
Name: 29349192
Synonym: BT_3784
Alternate gene names: NA
Gene position: 4912696-4910414 (Counterclockwise)
Preceding gene: 29349193
Following gene: 29349191
Centisome position: 78.47
GC content: 48.71
Gene sequence:
>2283_bases ATGAAAACACATTTTTCATTTAAACACCTGTTATTTATTGGAGGTGCGGTGTTGTACAGCATGCAAATTTCTGCCGTCAA GAATCCGGTAGACTATGTCAGCACGCTGGTAGGAACGCAGTCCAAGTTTGAGTTATCGACCGGAAATACCTATCCGGCTA CGGCACTGCCGTGGGGAATGAACTTCTGGACACCGCAAACCGGTAAAATGGGCGACGGTTGGGCATATACCTACAATGCC GACAAAATCCGGGGCTTCAAACAAACACATCAACCCAGCCCGTGGATGAACGACTACGGTCAGTTTTCCATCATGCCGAT CACAGGCGGACTGGTATTCGACCAGGACCAACGTGCCAGCTGGTTCTCGCACAAGGCGGAGGTTGCCAAACCTTATTATT ATAAGGTATATCTCGCAGACCACGACGTTACTACGGAACTCGTTCCGACGGAGCGTGCCGCTATGTTCCGTTTCACGTAT CCGGAAACCAAGAACGCTTATGTCGTTATCGACGCATTCGACAAAGGCTCTTATGTAAAGGTGATTCCGGAAGAAAACAA GATCATCGGTTATTCTACCAAGAACAGCGGCGGAGTGCCGGAGAACTTCAAGAATTATTTTGTCATCCAGTTCGACAAGC CGTTTACCTTTACTTCCGGCGTGAAAGAGAACAACATTCTCCCGAACGAAACAGAAGTTCAGGGCAACCATACCGGAGCG ATCATCGGATTCGCTACCCAGAAAGGGGAGATCGTTCACGCACGTGTAGCTTCTTCTTTTATCAGTTATGAGCAGGCGGA ACTGAATCTCAAAGAATTGGGCAAGGATAGTTTCGACCAGCTGGTCACTAAAGGAAAAGACATCTGGAACCGTGAAATGA GCAAAGTAGATGTGGAAGACGATAATATCGACAATCTGCGCACTTTCTATTCCTGCCTCTATCGTTCGATGCTGTTCCCA CGCAGCTTTTATGAAATAGACGCCAAAGGACAGGTCGTACACTACAGCCCTTACAACGGAAAAGTGCTACCGGGCTATAT GTTTACGGATACCGGCTTCTGGGATACGTTCCGCTGTCTGTTCCCATTCTTGAACCTGATGTATCCGTCCATGAATCAGA AGATGCAGGAAGGACTGGTCAATGCGTACCTTGAAAGCGGATTCCTTCCGGAATGGGCAAGTCCCGGACACCGTGACTGT ATGGTCGGCAACAACTCCGCTTCCGTAGTAGCCGACGCCTATATCAAAGGACTGCGCGGATATGACATCGAAACACTTTG GGAAGCATTGAAACATGACGCAAACGCCCATCTCCGCGGCACAGCTTCGGGCCGCCTTGCATACGACGCCTACAACAAAC TGGGTTATGTCCCCAACAATATCGGTATAGGACAGAATGTTGCCCGTACGCTGGAATATGCGTACAACGACTGGACCATC TACACGCTAGGCAAGAAACTGGGCAAACCGGCAAGCGAAATCGACATCTTCAAACAACGTGCACTCAACTACAAGAACGT CTACCACCCGAAACGCAAACTGATGGTAGGCAAAGACGACAAAGGTGTGTTCAACCCCAAATTTGATGCAGTAGACTGGA GCGGCGAGTTCTGCGAAGGTAACAGCTGGCACTGGAGTTTCTGCGTATTCCATGATCCGCAAGGACTGATCGACCTGATG GGAGGCAAGAAAGAATTCAACAACATGATGGATTCCGTCTTTGTCATTCCGGGCAAACAGGGTATGGAAAGCCGTGGCAT GATCCACGAAATGCGTGAAATGCAGGTAATGAACATGGGACAGTACGCTCACGGCAACCAGCCTATCCAGCACATGGTTT ATCTTTACAACTATTCGGGAGAACCGTGGAAGGCCCAGCATTGGGTTCGTGAAATCATGGACAAGCTCTACACGGCAGGC CCCGACGGATATTGCGGTGACGAAGACAACGGTCAGACTTCTGCCTGGTATGTCTTCTCGGCTTTAGGATTCTACCCCGT TTGTCCGGGAACAGATCAGTACATTCTGGGAACTCCCCTTTTCAAGTCAGCCAAGCTGCATCTGGAAAATGGAAAAACCG TCACAATAAAAGCAAGCAACAATAACACCGACAACCGTTATGTGAAGGATATGAAGGTAAATGGCAAGGCATTCACCCGC AATTATCTGACGCACGACCAATTACTGAAAGGAGCGAATATCCAGTATCAGATGAGTCCTACGCCGAACAAACAGCGGGG AACGACTGAAAAAGATATTCCCTATTCCCTTTCATTTGAATAA
Upstream 100 bases:
>100_bases GCGCCACAGGGCGATTTAGTGTTTCGACTTCCGGTAGCGGCATTCCTTTTCTCTCTATTTTCGTCACAGAAACTAATTTT ATTCATAAATTCATTTGTTC
Downstream 100 bases:
>100_bases AATGTCGTACTTTTGAATGCTTTAATGAATGATCTAATCCAAACAAACTAAAGAAAACATGAAACTAAGAAACCTTTTAT TTATCGTTCTTGCAGCGATA
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Cell Wall Antigen; Glycosyl Hydrolase; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Lipoprotein; Mannosidase
Number of amino acids: Translated: 760; Mature: 760
Protein sequence:
>760_residues MKTHFSFKHLLFIGGAVLYSMQISAVKNPVDYVSTLVGTQSKFELSTGNTYPATALPWGMNFWTPQTGKMGDGWAYTYNA DKIRGFKQTHQPSPWMNDYGQFSIMPITGGLVFDQDQRASWFSHKAEVAKPYYYKVYLADHDVTTELVPTERAAMFRFTY PETKNAYVVIDAFDKGSYVKVIPEENKIIGYSTKNSGGVPENFKNYFVIQFDKPFTFTSGVKENNILPNETEVQGNHTGA IIGFATQKGEIVHARVASSFISYEQAELNLKELGKDSFDQLVTKGKDIWNREMSKVDVEDDNIDNLRTFYSCLYRSMLFP RSFYEIDAKGQVVHYSPYNGKVLPGYMFTDTGFWDTFRCLFPFLNLMYPSMNQKMQEGLVNAYLESGFLPEWASPGHRDC MVGNNSASVVADAYIKGLRGYDIETLWEALKHDANAHLRGTASGRLAYDAYNKLGYVPNNIGIGQNVARTLEYAYNDWTI YTLGKKLGKPASEIDIFKQRALNYKNVYHPKRKLMVGKDDKGVFNPKFDAVDWSGEFCEGNSWHWSFCVFHDPQGLIDLM GGKKEFNNMMDSVFVIPGKQGMESRGMIHEMREMQVMNMGQYAHGNQPIQHMVYLYNYSGEPWKAQHWVREIMDKLYTAG PDGYCGDEDNGQTSAWYVFSALGFYPVCPGTDQYILGTPLFKSAKLHLENGKTVTIKASNNNTDNRYVKDMKVNGKAFTR NYLTHDQLLKGANIQYQMSPTPNKQRGTTEKDIPYSLSFE
Sequences:
>Translated_760_residues MKTHFSFKHLLFIGGAVLYSMQISAVKNPVDYVSTLVGTQSKFELSTGNTYPATALPWGMNFWTPQTGKMGDGWAYTYNA DKIRGFKQTHQPSPWMNDYGQFSIMPITGGLVFDQDQRASWFSHKAEVAKPYYYKVYLADHDVTTELVPTERAAMFRFTY PETKNAYVVIDAFDKGSYVKVIPEENKIIGYSTKNSGGVPENFKNYFVIQFDKPFTFTSGVKENNILPNETEVQGNHTGA IIGFATQKGEIVHARVASSFISYEQAELNLKELGKDSFDQLVTKGKDIWNREMSKVDVEDDNIDNLRTFYSCLYRSMLFP RSFYEIDAKGQVVHYSPYNGKVLPGYMFTDTGFWDTFRCLFPFLNLMYPSMNQKMQEGLVNAYLESGFLPEWASPGHRDC MVGNNSASVVADAYIKGLRGYDIETLWEALKHDANAHLRGTASGRLAYDAYNKLGYVPNNIGIGQNVARTLEYAYNDWTI YTLGKKLGKPASEIDIFKQRALNYKNVYHPKRKLMVGKDDKGVFNPKFDAVDWSGEFCEGNSWHWSFCVFHDPQGLIDLM GGKKEFNNMMDSVFVIPGKQGMESRGMIHEMREMQVMNMGQYAHGNQPIQHMVYLYNYSGEPWKAQHWVREIMDKLYTAG PDGYCGDEDNGQTSAWYVFSALGFYPVCPGTDQYILGTPLFKSAKLHLENGKTVTIKASNNNTDNRYVKDMKVNGKAFTR NYLTHDQLLKGANIQYQMSPTPNKQRGTTEKDIPYSLSFE >Mature_760_residues MKTHFSFKHLLFIGGAVLYSMQISAVKNPVDYVSTLVGTQSKFELSTGNTYPATALPWGMNFWTPQTGKMGDGWAYTYNA DKIRGFKQTHQPSPWMNDYGQFSIMPITGGLVFDQDQRASWFSHKAEVAKPYYYKVYLADHDVTTELVPTERAAMFRFTY PETKNAYVVIDAFDKGSYVKVIPEENKIIGYSTKNSGGVPENFKNYFVIQFDKPFTFTSGVKENNILPNETEVQGNHTGA IIGFATQKGEIVHARVASSFISYEQAELNLKELGKDSFDQLVTKGKDIWNREMSKVDVEDDNIDNLRTFYSCLYRSMLFP RSFYEIDAKGQVVHYSPYNGKVLPGYMFTDTGFWDTFRCLFPFLNLMYPSMNQKMQEGLVNAYLESGFLPEWASPGHRDC MVGNNSASVVADAYIKGLRGYDIETLWEALKHDANAHLRGTASGRLAYDAYNKLGYVPNNIGIGQNVARTLEYAYNDWTI YTLGKKLGKPASEIDIFKQRALNYKNVYHPKRKLMVGKDDKGVFNPKFDAVDWSGEFCEGNSWHWSFCVFHDPQGLIDLM GGKKEFNNMMDSVFVIPGKQGMESRGMIHEMREMQVMNMGQYAHGNQPIQHMVYLYNYSGEPWKAQHWVREIMDKLYTAG PDGYCGDEDNGQTSAWYVFSALGFYPVCPGTDQYILGTPLFKSAKLHLENGKTVTIKASNNNTDNRYVKDMKVNGKAFTR NYLTHDQLLKGANIQYQMSPTPNKQRGTTEKDIPYSLSFE
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86511; Mature: 86511
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHFSFKHLLFIGGAVLYSMQISAVKNPVDYVSTLVGTQSKFELSTGNTYPATALPWGM CCCCCCHHHHHHHCCHHHHEEEHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC NFWTPQTGKMGDGWAYTYNADKIRGFKQTHQPSPWMNDYGQFSIMPITGGLVFDQDQRAS CCCCCCCCCCCCCEEEEECHHHHCCHHHCCCCCCCCCCCCCEEEEEEECCEEECCCCCHH WFSHKAEVAKPYYYKVYLADHDVTTELVPTERAAMFRFTYPETKNAYVVIDAFDKGSYVK HHHHHHHHCCCEEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEE VIPEENKIIGYSTKNSGGVPENFKNYFVIQFDKPFTFTSGVKENNILPNETEVQGNHTGA EECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCEECCCCCEE IIGFATQKGEIVHARVASSFISYEQAELNLKELGKDSFDQLVTKGKDIWNREMSKVDVED EEEEECCCCCEEEHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCHHHHCCHHHEECCCC DNIDNLRTFYSCLYRSMLFPRSFYEIDAKGQVVHYSPYNGKVLPGYMFTDTGFWDTFRCL CCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCEEECCEEEECCCCHHHHHHH FPFLNLMYPSMNQKMQEGLVNAYLESGFLPEWASPGHRDCMVGNNSASVVADAYIKGLRG HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCC YDIETLWEALKHDANAHLRGTASGRLAYDAYNKLGYVPNNIGIGQNVARTLEYAYNDWTI CCHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEE YTLGKKLGKPASEIDIFKQRALNYKNVYHPKRKLMVGKDDKGVFNPKFDAVDWSGEFCEG EEECHHHCCCHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCC NSWHWSFCVFHDPQGLIDLMGGKKEFNNMMDSVFVIPGKQGMESRGMIHEMREMQVMNMG CCEEEEEEEEECCCCHHHHCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC QYAHGNQPIQHMVYLYNYSGEPWKAQHWVREIMDKLYTAGPDGYCGDEDNGQTSAWYVFS CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEEE ALGFYPVCPGTDQYILGTPLFKSAKLHLENGKTVTIKASNNNTDNRYVKDMKVNGKAFTR CCCCEECCCCCCCEEECCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEEECCCEEEH NYLTHDQLLKGANIQYQMSPTPNKQRGTTEKDIPYSLSFE HHCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure MKTHFSFKHLLFIGGAVLYSMQISAVKNPVDYVSTLVGTQSKFELSTGNTYPATALPWGM CCCCCCHHHHHHHCCHHHHEEEHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC NFWTPQTGKMGDGWAYTYNADKIRGFKQTHQPSPWMNDYGQFSIMPITGGLVFDQDQRAS CCCCCCCCCCCCCEEEEECHHHHCCHHHCCCCCCCCCCCCCEEEEEEECCEEECCCCCHH WFSHKAEVAKPYYYKVYLADHDVTTELVPTERAAMFRFTYPETKNAYVVIDAFDKGSYVK HHHHHHHHCCCEEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEE VIPEENKIIGYSTKNSGGVPENFKNYFVIQFDKPFTFTSGVKENNILPNETEVQGNHTGA EECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCEECCCCCEE IIGFATQKGEIVHARVASSFISYEQAELNLKELGKDSFDQLVTKGKDIWNREMSKVDVED EEEEECCCCCEEEHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCHHHHCCHHHEECCCC DNIDNLRTFYSCLYRSMLFPRSFYEIDAKGQVVHYSPYNGKVLPGYMFTDTGFWDTFRCL CCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCEEECCEEEECCCCHHHHHHH FPFLNLMYPSMNQKMQEGLVNAYLESGFLPEWASPGHRDCMVGNNSASVVADAYIKGLRG HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCC YDIETLWEALKHDANAHLRGTASGRLAYDAYNKLGYVPNNIGIGQNVARTLEYAYNDWTI CCHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEE YTLGKKLGKPASEIDIFKQRALNYKNVYHPKRKLMVGKDDKGVFNPKFDAVDWSGEFCEG EEECHHHCCCHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCC NSWHWSFCVFHDPQGLIDLMGGKKEFNNMMDSVFVIPGKQGMESRGMIHEMREMQVMNMG CCEEEEEEEEECCCCHHHHCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC QYAHGNQPIQHMVYLYNYSGEPWKAQHWVREIMDKLYTAGPDGYCGDEDNGQTSAWYVFS CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEEE ALGFYPVCPGTDQYILGTPLFKSAKLHLENGKTVTIKASNNNTDNRYVKDMKVNGKAFTR CCCCEECCCCCCCEEECCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEEECCCEEEH NYLTHDQLLKGANIQYQMSPTPNKQRGTTEKDIPYSLSFE HHCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA