| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349191
Identifier: 29349191
GI number: 29349191
Start: 4909408
End: 4910355
Strand: Reverse
Name: 29349191
Synonym: BT_3783
Alternate gene names: NA
Gene position: 4910355-4909408 (Counterclockwise)
Preceding gene: 29349192
Following gene: 29349190
Centisome position: 78.44
GC content: 49.37
Gene sequence:
>948_bases ATGAAACTAAGAAACCTTTTATTTATCGTTCTTGCAGCGATAGTCTTCTGCAACTGTCAGAGCTATCAGCCTACTTCGCT CACCGTTGCCTCCTACAACCTGAGAAATGCCAACGGTTCCGACTCCGCCCGTGGAGACGGATGGGGACAGCGTTATCCGG TGATTGCCCAGATGGTGCAATATCACGATTTCGATATTTTCGGCACACAGGAATGCTTCCTTCACCAACTGAAAGACATG AAAGAAGCCCTTCCCGGTTATGACTATATCGGCGTAGGCCGCGACGACGGTAAAGACAAAGGCGAACACTCCGCTATCTT CTACCGCACCGACAAATTCGACATCGTAGAAAAAGGAGATTTCTGGCTGTCGGAAACTCCGGACGTGCCGAGCAAAGGCT GGGATGCCGTATTGCCTCGTATTTGCAGCTGGGGGCACTTCAAATGCAAAGATACCGGTTTCGAGTTTCTGTTCTTCAAT CTCCACATGGACCACATCGGCAAGAAAGCCCGTGTGGAGAGCGCTTTCCTCGTACAGGAAAAGATGAAAGAGCTGGGAAG AGGCAAGAATCTGCCGGCTATCCTGACGGGAGACTTCAACGTCGACCAGACCCACCAGTCCTACGACGCATTTGTCAGCA AAGGCGTCCTCTGTGATTCTTACGAGAAGTGCGACTACCGATATGCGCTCAACGGAACTTTCAACAACTTCGATCCGAAC AGTTTTACCGAAAGCCGCATCGACCATATCTTCGTTTCACCTTCTTTCCACGTCAAGAGATACGGTGTGCTGACAGATAC CTATCGGAGTGTACGGGAAAACAGTAAAAAGGAGGACGTGAGAGATTGTCCGGAAGAGATCACCATTAAGGCTTATGAAG CACGTACACCATCCGACCATTTCCCTGTAAAAGTGGAACTGGTGTTTGACCAACGTCAGCAAAAATAA
Upstream 100 bases:
>100_bases ACGACTGAAAAAGATATTCCCTATTCCCTTTCATTTGAATAAAATGTCGTACTTTTGAATGCTTTAATGAATGATCTAAT CCAAACAAACTAAAGAAAAC
Downstream 100 bases:
>100_bases CCCCGAATACTTCATTTAATAATCTGATACCCATATGAGAAATATATGTTTTGTAGCCTGTATGTTGTTTTGCCTCGCTT CCGCTTCCGGAAAAACGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Metal-Dependent Hydrolase; Secreted Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDGWGQRYPVIAQMVQYHDFDIFGTQECFLHQLKDM KEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFN LHMDHIGKKARVESAFLVQEKMKELGRGKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPN SFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVELVFDQRQQK
Sequences:
>Translated_315_residues MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDGWGQRYPVIAQMVQYHDFDIFGTQECFLHQLKDM KEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFN LHMDHIGKKARVESAFLVQEKMKELGRGKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPN SFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVELVFDQRQQK >Mature_315_residues MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDGWGQRYPVIAQMVQYHDFDIFGTQECFLHQLKDM KEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFN LHMDHIGKKARVESAFLVQEKMKELGRGKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPN SFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVELVFDQRQQK
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36254; Mature: 36254
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDGWGQRYPVIAQMVQ CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH YHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGD HCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCEEECCC FWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQE EEECCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEEEEEHHHCCCHHHHHHHHHHHH KMKELGRGKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPN HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCCC SFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDH CHHHHCCCEEEECCCCCEEEECCHHHHHHHHHHCCCHHHHHCCCHHHEEEEEECCCCCCC FPVKVELVFDQRQQK CCEEEEEEECCCCCC >Mature Secondary Structure MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDGWGQRYPVIAQMVQ CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH YHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGD HCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCEEECCC FWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQE EEECCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEEEEEHHHCCCHHHHHHHHHHHH KMKELGRGKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPN HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCCC SFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDH CHHHHCCCEEEECCCCCEEEECCHHHHHHHHHHCCCHHHHHCCCHHHEEEEEECCCCCCC FPVKVELVFDQRQQK CCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA