| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349187
Identifier: 29349187
GI number: 29349187
Start: 4903448
End: 4904869
Strand: Reverse
Name: 29349187
Synonym: BT_3779
Alternate gene names: NA
Gene position: 4904869-4903448 (Counterclockwise)
Preceding gene: 29349188
Following gene: 29349186
Centisome position: 78.35
GC content: 32.98
Gene sequence:
>1422_bases ATGAAAATAGTACAAACCTTTTGGCATGGAAATAATTCATTGTTAGACAATAGTTTTGGATGGATGAATCCACAATACCA TTTAATGTCATGGGCATTAAGTTGTCTTTCTTTAAAAGACAACTATCAAAATATCGTTTTATATACCGATTCCCATGGAT ATGAAATCTTTGCCGAACAATTGAAACTACCGTATACAGATATCATCATTCAATACGACAATCTAACTTGCCCTGAACCT CATTGGGCATATCCCAAGTTATTAACCTATTCACTCCAAAAAGAACCCTTCATACATGTAGACGGAGATGTATATTTGCC TAATAAACTAGACAACACCATAGAGATGAGTGAATTGATTGCTCAGAACAAAGAAATAGGAAGCAGTTATTATAAAAGTA TGATGAATCATATTCTACAAAAAGATTTATTAATGCCATCCTTCCTAAAAAAAGAATTAGAAAAAGACTCTATCATGTCA TATAATGCAGGAATTATCGGAGGAAATGACTTGGAGTTTATAGCTGAATACTGCCGGACTGCATTTAACTTTATCGAATC AAACCATTTAAATGATATAAACAGCAAAGATATTCACATAAATAACAATATCCTCTTTGAACAAATATTGTTTTATGCCC AGTCAAACAGTTATAACAAACCTGTGGCAACAGTCCTTGATCACAGCGTTCGTGACAATGGATACATTTATGATGATTTC TGTAATTTTTATCTATACGACAAAGCCAAACTATTACATATCATCGGCGGACATAAAAAGAACCAACGGATTTGTGATTT ACTTAGCAAAACTCTATTAAATAAATATCCTGACTATTACAATAGAGTAGTAGAATTGTTCGCGAATAATCATAAGCGAA TGCAAAACAAGGCTAAAAATACTACCTTCCCCGATTTGAGTGTACAAATGTGTATTGCATCCTATCAAGATTATCTTCAT TCTTTGTCCAAAAAATGGGAAAAGCTATCTTATACCGATCTGTATGATTGGGAGAAATGCTCATCTTCCTATTTCATGTT TCTAAATGCCGGAAAAGAGGAACAAGCCATATTTACTATTAATAGAAATCCCTACCTATCCATTTACGAAATTCCGGAAC CCTGGCCGACAGAAGCAAAAAAACTGCTTAAAGAACGTATAAACAAAGAGTGCCATTCAGACCACTTTGATATAGTATGC ATTCCATGTCTGCTATATGAGGGTTTTAAAGAAGTGCTTATTAACGATTTATGTTATAATATTCTGATTCTCATAGAAGA AGAGAAGACATTTGAATGTCTGTTCAACGAATTGCTACCTTGTTTTTCATCTGAAATCAGCAAAGATAAAGAACAAACTT ACAAATTAATTCTGACGGAAGTAGAATATCTTCTTTATCATGGGGTGATATGTATCAATTGA
Upstream 100 bases:
>100_bases TTGCGCCAACCATGCGAATTAGCCCTATCTGAAGGACCTTTTCCTCCACATTATTACTAATTTTATCACTATAGAAATAA CACACAACAAATCAATAGTT
Downstream 100 bases:
>100_bases TTTCAACTTAAACAAGTGTATAAACTTATCTATGCATCCAAAAGAAACGACTTTATTTATAAACACTAAAATTATCATGT ATTATGGAAAAGAAAAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MKIVQTFWHGNNSLLDNSFGWMNPQYHLMSWALSCLSLKDNYQNIVLYTDSHGYEIFAEQLKLPYTDIIIQYDNLTCPEP HWAYPKLLTYSLQKEPFIHVDGDVYLPNKLDNTIEMSELIAQNKEIGSSYYKSMMNHILQKDLLMPSFLKKELEKDSIMS YNAGIIGGNDLEFIAEYCRTAFNFIESNHLNDINSKDIHINNNILFEQILFYAQSNSYNKPVATVLDHSVRDNGYIYDDF CNFYLYDKAKLLHIIGGHKKNQRICDLLSKTLLNKYPDYYNRVVELFANNHKRMQNKAKNTTFPDLSVQMCIASYQDYLH SLSKKWEKLSYTDLYDWEKCSSSYFMFLNAGKEEQAIFTINRNPYLSIYEIPEPWPTEAKKLLKERINKECHSDHFDIVC IPCLLYEGFKEVLINDLCYNILILIEEEKTFECLFNELLPCFSSEISKDKEQTYKLILTEVEYLLYHGVICIN
Sequences:
>Translated_473_residues MKIVQTFWHGNNSLLDNSFGWMNPQYHLMSWALSCLSLKDNYQNIVLYTDSHGYEIFAEQLKLPYTDIIIQYDNLTCPEP HWAYPKLLTYSLQKEPFIHVDGDVYLPNKLDNTIEMSELIAQNKEIGSSYYKSMMNHILQKDLLMPSFLKKELEKDSIMS YNAGIIGGNDLEFIAEYCRTAFNFIESNHLNDINSKDIHINNNILFEQILFYAQSNSYNKPVATVLDHSVRDNGYIYDDF CNFYLYDKAKLLHIIGGHKKNQRICDLLSKTLLNKYPDYYNRVVELFANNHKRMQNKAKNTTFPDLSVQMCIASYQDYLH SLSKKWEKLSYTDLYDWEKCSSSYFMFLNAGKEEQAIFTINRNPYLSIYEIPEPWPTEAKKLLKERINKECHSDHFDIVC IPCLLYEGFKEVLINDLCYNILILIEEEKTFECLFNELLPCFSSEISKDKEQTYKLILTEVEYLLYHGVICIN >Mature_473_residues MKIVQTFWHGNNSLLDNSFGWMNPQYHLMSWALSCLSLKDNYQNIVLYTDSHGYEIFAEQLKLPYTDIIIQYDNLTCPEP HWAYPKLLTYSLQKEPFIHVDGDVYLPNKLDNTIEMSELIAQNKEIGSSYYKSMMNHILQKDLLMPSFLKKELEKDSIMS YNAGIIGGNDLEFIAEYCRTAFNFIESNHLNDINSKDIHINNNILFEQILFYAQSNSYNKPVATVLDHSVRDNGYIYDDF CNFYLYDKAKLLHIIGGHKKNQRICDLLSKTLLNKYPDYYNRVVELFANNHKRMQNKAKNTTFPDLSVQMCIASYQDYLH SLSKKWEKLSYTDLYDWEKCSSSYFMFLNAGKEEQAIFTINRNPYLSIYEIPEPWPTEAKKLLKERINKECHSDHFDIVC IPCLLYEGFKEVLINDLCYNILILIEEEKTFECLFNELLPCFSSEISKDKEQTYKLILTEVEYLLYHGVICIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55681; Mature: 55681
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVQTFWHGNNSLLDNSFGWMNPQYHLMSWALSCLSLKDNYQNIVLYTDSHGYEIFAEQ CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH LKLPYTDIIIQYDNLTCPEPHWAYPKLLTYSLQKEPFIHVDGDVYLPNKLDNTIEMSELI HCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEECCCCCCCHHHHHHHH AQNKEIGSSYYKSMMNHILQKDLLMPSFLKKELEKDSIMSYNAGIIGGNDLEFIAEYCRT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHCCCCCEECCCHHHHHHHHHHH AFNFIESNHLNDINSKDIHINNNILFEQILFYAQSNSYNKPVATVLDHSVRDNGYIYDDF HHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECC CNFYLYDKAKLLHIIGGHKKNQRICDLLSKTLLNKYPDYYNRVVELFANNHKRMQNKAKN CCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHCC TTFPDLSVQMCIASYQDYLHSLSKKWEKLSYTDLYDWEKCSSSYFMFLNAGKEEQAIFTI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCEEEEE NRNPYLSIYEIPEPWPTEAKKLLKERINKECHSDHFDIVCIPCLLYEGFKEVLINDLCYN CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHE ILILIEEEKTFECLFNELLPCFSSEISKDKEQTYKLILTEVEYLLYHGVICIN EEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEC >Mature Secondary Structure MKIVQTFWHGNNSLLDNSFGWMNPQYHLMSWALSCLSLKDNYQNIVLYTDSHGYEIFAEQ CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH LKLPYTDIIIQYDNLTCPEPHWAYPKLLTYSLQKEPFIHVDGDVYLPNKLDNTIEMSELI HCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEECCCCCCCHHHHHHHH AQNKEIGSSYYKSMMNHILQKDLLMPSFLKKELEKDSIMSYNAGIIGGNDLEFIAEYCRT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHCCCCCEECCCHHHHHHHHHHH AFNFIESNHLNDINSKDIHINNNILFEQILFYAQSNSYNKPVATVLDHSVRDNGYIYDDF HHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECC CNFYLYDKAKLLHIIGGHKKNQRICDLLSKTLLNKYPDYYNRVVELFANNHKRMQNKAKN CCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHCC TTFPDLSVQMCIASYQDYLHSLSKKWEKLSYTDLYDWEKCSSSYFMFLNAGKEEQAIFTI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCEEEEE NRNPYLSIYEIPEPWPTEAKKLLKERINKECHSDHFDIVCIPCLLYEGFKEVLINDLCYN CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHE ILILIEEEKTFECLFNELLPCFSSEISKDKEQTYKLILTEVEYLLYHGVICIN EEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA