| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349152
Identifier: 29349152
GI number: 29349152
Start: 4861762
End: 4862547
Strand: Reverse
Name: 29349152
Synonym: BT_3744
Alternate gene names: NA
Gene position: 4862547-4861762 (Counterclockwise)
Preceding gene: 29349153
Following gene: 29349147
Centisome position: 77.67
GC content: 39.95
Gene sequence:
>786_bases ATGAAAAGATATAAATTACTCAATATTATAGCTGTACTACTATTAGTAAGTACACTTTCAGCGCAGGCGCAAGAAGAAAG AAATCAAGGTATCATCTGGTCGTACTTACACGGATGGGAATATGGAATCAAGGCAGGTTTCAGTATTGGAGGAACTTCTC CATTGCCTCTACCTGAAGAAATTCGCAAAATAGATAGCTATGCCCCTGGTGGCCTCGCCATTTCAATTGAAGGAAACGCA ACTAAATGGTTTGACACGAAATGGGGAATGACTGTAGGGGTACGACTTGAAAACAAGAATATGACCACAGAAGCTACAGT AAAGAACTATGGGATGAAGATTATCAACACCAACGGTGGAGAGTTACAAGGCTTATGGACCGGTGGTGTAAAGACTAAAG TCAAAAACTCTTATCTGACTATCCCAGTAGTTGCCAACTATAAAGTAAGCAAACGTTGGAAAGTCTCAGCAGGTCCGTAT GTATCTTATCTTATTGAAAGAAACTTCTCCGGACATGTATATGAAGGTCACTTGCGTACTCCGGATCAGACAGGTTCGCG AGTAGATTTTACTGGTGAAAGCATTGCTACTTATGATTTCTCTGACAATCTGCGTAAATTCCAATGGGGATTGCAACTAG GCGGTGAGTGGAGAGCATTCAAACATTTAAATGTGTATGCTGATTTAACATGGGGCTTGAACGATATCTTCAAAAAGGAT TTTGATACCATCTCATTCGCTATGTATCCTATTTATTTGAATATAGGATTCGGATATGCGTTCTAG
Upstream 100 bases:
>100_bases TTCGTCCAGTGTAGACGGTGCTTATTTTAAGGGAGCAGTAGGCAGTACACTGTATGTCGATGAAGTAGAACTTATTTGCG AAGACTAAAAAAACAAGAAA
Downstream 100 bases:
>100_bases AGAAAACACTACAATTTATTTAAATAAAAACAACTAAAAAAGCCGTTAATTTTAATTGCATTAATGTATACAATTGGAAT TAACGGCTTTTTCTGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKRYKLLNIIAVLLLVSTLSAQAQEERNQGIIWSYLHGWEYGIKAGFSIGGTSPLPLPEEIRKIDSYAPGGLAISIEGNA TKWFDTKWGMTVGVRLENKNMTTEATVKNYGMKIINTNGGELQGLWTGGVKTKVKNSYLTIPVVANYKVSKRWKVSAGPY VSYLIERNFSGHVYEGHLRTPDQTGSRVDFTGESIATYDFSDNLRKFQWGLQLGGEWRAFKHLNVYADLTWGLNDIFKKD FDTISFAMYPIYLNIGFGYAF
Sequences:
>Translated_261_residues MKRYKLLNIIAVLLLVSTLSAQAQEERNQGIIWSYLHGWEYGIKAGFSIGGTSPLPLPEEIRKIDSYAPGGLAISIEGNA TKWFDTKWGMTVGVRLENKNMTTEATVKNYGMKIINTNGGELQGLWTGGVKTKVKNSYLTIPVVANYKVSKRWKVSAGPY VSYLIERNFSGHVYEGHLRTPDQTGSRVDFTGESIATYDFSDNLRKFQWGLQLGGEWRAFKHLNVYADLTWGLNDIFKKD FDTISFAMYPIYLNIGFGYAF >Mature_261_residues MKRYKLLNIIAVLLLVSTLSAQAQEERNQGIIWSYLHGWEYGIKAGFSIGGTSPLPLPEEIRKIDSYAPGGLAISIEGNA TKWFDTKWGMTVGVRLENKNMTTEATVKNYGMKIINTNGGELQGLWTGGVKTKVKNSYLTIPVVANYKVSKRWKVSAGPY VSYLIERNFSGHVYEGHLRTPDQTGSRVDFTGESIATYDFSDNLRKFQWGLQLGGEWRAFKHLNVYADLTWGLNDIFKKD FDTISFAMYPIYLNIGFGYAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29441; Mature: 29441
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYKLLNIIAVLLLVSTLSAQAQEERNQGIIWSYLHGWEYGIKAGFSIGGTSPLPLPEE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECCCEECCCCCCCCCCCCHHH IRKIDSYAPGGLAISIEGNATKWFDTKWGMTVGVRLENKNMTTEATVKNYGMKIINTNGG HHHHHCCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCEEEEHHHCCEEEEECCCC ELQGLWTGGVKTKVKNSYLTIPVVANYKVSKRWKVSAGPYVSYLIERNFSGHVYEGHLRT EEEEEEECCEEEEECCCEEEEEEEECCEECCEEEECCCCEEEEEEECCCCCCEEECCCCC PDQTGSRVDFTGESIATYDFSDNLRKFQWGLQLGGEWRAFKHLNVYADLTWGLNDIFKKD CCCCCCEEEECCCEEEEEECCCCCEEEEEEEEECCCEEEEEEEEEEEEEECCHHHHHHCC FDTISFAMYPIYLNIGFGYAF CCEEEEEEEEEEEEECCEECC >Mature Secondary Structure MKRYKLLNIIAVLLLVSTLSAQAQEERNQGIIWSYLHGWEYGIKAGFSIGGTSPLPLPEE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECCCEECCCCCCCCCCCCHHH IRKIDSYAPGGLAISIEGNATKWFDTKWGMTVGVRLENKNMTTEATVKNYGMKIINTNGG HHHHHCCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCEEEEHHHCCEEEEECCCC ELQGLWTGGVKTKVKNSYLTIPVVANYKVSKRWKVSAGPYVSYLIERNFSGHVYEGHLRT EEEEEEECCEEEEECCCEEEEEEEECCEECCEEEECCCCEEEEEEECCCCCCEEECCCCC PDQTGSRVDFTGESIATYDFSDNLRKFQWGLQLGGEWRAFKHLNVYADLTWGLNDIFKKD CCCCCCEEEECCCEEEEEECCCCCEEEEEEEEECCCEEEEEEEEEEEEEECCHHHHHHCC FDTISFAMYPIYLNIGFGYAF CCEEEEEEEEEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA