Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349135

Identifier: 29349135

GI number: 29349135

Start: 4837239

End: 4838720

Strand: Reverse

Name: 29349135

Synonym: BT_3727

Alternate gene names: NA

Gene position: 4838720-4837239 (Counterclockwise)

Preceding gene: 29349136

Following gene: 29349134

Centisome position: 77.29

GC content: 38.53

Gene sequence:

>1482_bases
ATGAGAATAAAGTTTTTATCAATCATTGCGAGTTTTTTCATGGTGTCATTCGTTATTACGTCTTGCCTTGACAATGATAA
CGAAGTCAATTATAGTCCGGATGCGACTATACGCGCATTTGAACTTGACACTATAGGTTATGGGGTAAACTATAAATTCA
CAATTGACCAAGTTAGTCGTTTAATATATAATGTGGATTCACTGCCTGTCAATGCTGACACGATCATTAATAGTATTCTG
ATCAAGACGCTGACAACAGCATCCGGTATCGTGACGATGAAAGATCAGAACGATCAGGATTCAATCGTTAATATTAACGA
CTCTATTGACCTGACTAAGTATGTAAATGCAACCGAGAAAAACAACTTTCTGGTACTGAAGGTATGGGCACCGAATATGG
AGGTTCAGAATGAGTATAAAGTTAATATACGGATGCATACGATGGTTCCCGATTCACTCAGTTGGGGAAAAGACCCTATA
GCGAACAATCCCGTGAGGAACACTGCTGAAAAACAAAAGGTAGTAACGCTTGGGGACAAGATATTATTATTCGCTCAAAA
CAATGAAATTTACAGTACAGCAATACCGGCAGGCTCTCCTACTGATCGTTTAAACTATGGTCAAAAATGGGATAAAGAAA
CTACTGGCAAACTTCCTGATGGTGCTGATGTTACCTCCATTATCCGATTCGTTGACAAGTTATATTTACTTACTAAGAAT
AAGGAAGTATATAATTCCAATGACGGTTTGACTTGGACAAAAGATGAAGTACTCAATTCCGATGGCGTTTCCGTTACTAA
TCTGATAACCAGTTTTTCTGACAGTGATGGCAGTAACCATAAAAAGATAAATGGAATAGCAGGTATAGTAGAAATCAATG
GAGAGAAATATTTCAGTTTTGCAGAGAAAGATGTAACATGGGAGAAAGATATAGACAAATTAACAGTTGTTCCTGCAGAG
TTCCCGATAAACAACCTGTCAGCCGATGTATATGCAACTGAAAGCGGAACGTTGAATGCAATCGTTGTGGGTAATACAGA
AGACGGTTTAGACAATGACACAGCTACAGTCGTTTGGGCTTCAGAAGATGGTAAAGCCTGGATTCCAATGGAGATTCCAT
CAAATAACAACTGTCCGAAATTAGTAGACCCGTCTATTATACATTATAACGACGCATTTTACATTTGTGGAAAAGAAACT
AAAGATGATGCTAAGGGATTCCAGAAATTCTATACCTCCCCGACATTACTTGTATGGAAAGGGGTAGACAGAATGTTCAT
GCTTCCCGGAATTCTTCCTCCGGTGAAACTTGAAGGAGGAGTAACACAACATCCTTCTCTTCACGAATCCAGCTTCAAGG
GAAAAGAAGTAAACTACACAATGGTAGTTGACAGAAACCATTATATATGGATGGTAGGTGGTCAAGGTATTGACAAAATC
TGGCGTGGTAGAGTTAATAAACTCGGATTTCTAATACAGTAA

Upstream 100 bases:

>100_bases
GCGTTATTATCTATAATTTTATATAAAACTTCCCCTTAATGTTCTATATCGGAAAAAATGTTCCTATTTTTGCAACTTGT
AAATAAACACAATCTTTCAA

Downstream 100 bases:

>100_bases
TAAGAAGTAGTTAAATACGAACCTTATAATCAAAACATGTCCTATATAGAGAAAATAGACAAAAATCGGATTCCCCAGCA
CATAGCCATCATTATGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MRIKFLSIIASFFMVSFVITSCLDNDNEVNYSPDATIRAFELDTIGYGVNYKFTIDQVSRLIYNVDSLPVNADTIINSIL
IKTLTTASGIVTMKDQNDQDSIVNINDSIDLTKYVNATEKNNFLVLKVWAPNMEVQNEYKVNIRMHTMVPDSLSWGKDPI
ANNPVRNTAEKQKVVTLGDKILLFAQNNEIYSTAIPAGSPTDRLNYGQKWDKETTGKLPDGADVTSIIRFVDKLYLLTKN
KEVYNSNDGLTWTKDEVLNSDGVSVTNLITSFSDSDGSNHKKINGIAGIVEINGEKYFSFAEKDVTWEKDIDKLTVVPAE
FPINNLSADVYATESGTLNAIVVGNTEDGLDNDTATVVWASEDGKAWIPMEIPSNNNCPKLVDPSIIHYNDAFYICGKET
KDDAKGFQKFYTSPTLLVWKGVDRMFMLPGILPPVKLEGGVTQHPSLHESSFKGKEVNYTMVVDRNHYIWMVGGQGIDKI
WRGRVNKLGFLIQ

Sequences:

>Translated_493_residues
MRIKFLSIIASFFMVSFVITSCLDNDNEVNYSPDATIRAFELDTIGYGVNYKFTIDQVSRLIYNVDSLPVNADTIINSIL
IKTLTTASGIVTMKDQNDQDSIVNINDSIDLTKYVNATEKNNFLVLKVWAPNMEVQNEYKVNIRMHTMVPDSLSWGKDPI
ANNPVRNTAEKQKVVTLGDKILLFAQNNEIYSTAIPAGSPTDRLNYGQKWDKETTGKLPDGADVTSIIRFVDKLYLLTKN
KEVYNSNDGLTWTKDEVLNSDGVSVTNLITSFSDSDGSNHKKINGIAGIVEINGEKYFSFAEKDVTWEKDIDKLTVVPAE
FPINNLSADVYATESGTLNAIVVGNTEDGLDNDTATVVWASEDGKAWIPMEIPSNNNCPKLVDPSIIHYNDAFYICGKET
KDDAKGFQKFYTSPTLLVWKGVDRMFMLPGILPPVKLEGGVTQHPSLHESSFKGKEVNYTMVVDRNHYIWMVGGQGIDKI
WRGRVNKLGFLIQ
>Mature_493_residues
MRIKFLSIIASFFMVSFVITSCLDNDNEVNYSPDATIRAFELDTIGYGVNYKFTIDQVSRLIYNVDSLPVNADTIINSIL
IKTLTTASGIVTMKDQNDQDSIVNINDSIDLTKYVNATEKNNFLVLKVWAPNMEVQNEYKVNIRMHTMVPDSLSWGKDPI
ANNPVRNTAEKQKVVTLGDKILLFAQNNEIYSTAIPAGSPTDRLNYGQKWDKETTGKLPDGADVTSIIRFVDKLYLLTKN
KEVYNSNDGLTWTKDEVLNSDGVSVTNLITSFSDSDGSNHKKINGIAGIVEINGEKYFSFAEKDVTWEKDIDKLTVVPAE
FPINNLSADVYATESGTLNAIVVGNTEDGLDNDTATVVWASEDGKAWIPMEIPSNNNCPKLVDPSIIHYNDAFYICGKET
KDDAKGFQKFYTSPTLLVWKGVDRMFMLPGILPPVKLEGGVTQHPSLHESSFKGKEVNYTMVVDRNHYIWMVGGQGIDKI
WRGRVNKLGFLIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55055; Mature: 55055

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKFLSIIASFFMVSFVITSCLDNDNEVNYSPDATIRAFELDTIGYGVNYKFTIDQVSR
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEHHHHHH
LIYNVDSLPVNADTIINSILIKTLTTASGIVTMKDQNDQDSIVNINDSIDLTKYVNATEK
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCEEEEECCCCC
NNFLVLKVWAPNMEVQNEYKVNIRMHTMVPDSLSWGKDPIANNPVRNTAEKQKVVTLGDK
CCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCEEEEECCE
ILLFAQNNEIYSTAIPAGSPTDRLNYGQKWDKETTGKLPDGADVTSIIRFVDKLYLLTKN
EEEEEECCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECC
KEVYNSNDGLTWTKDEVLNSDGVSVTNLITSFSDSDGSNHKKINGIAGIVEINGEKYFSF
CEEEECCCCCEEEHHHHCCCCCCCHHHHHHHCCCCCCCCCEEECCEEEEEEECCCEEEEE
AEKDVTWEKDIDKLTVVPAEFPINNLSADVYATESGTLNAIVVGNTEDGLDNDTATVVWA
CCCCCCHHCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEE
SEDGKAWIPMEIPSNNNCPKLVDPSIIHYNDAFYICGKETKDDAKGFQKFYTSPTLLVWK
CCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHCCCEEEEEC
GVDRMFMLPGILPPVKLEGGVTQHPSLHESSFKGKEVNYTMVVDRNHYIWMVGGQGIDKI
CCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCHHHH
WRGRVNKLGFLIQ
HHCCHHHCCEEEC
>Mature Secondary Structure
MRIKFLSIIASFFMVSFVITSCLDNDNEVNYSPDATIRAFELDTIGYGVNYKFTIDQVSR
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEHHHHHH
LIYNVDSLPVNADTIINSILIKTLTTASGIVTMKDQNDQDSIVNINDSIDLTKYVNATEK
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCEEEEECCCCC
NNFLVLKVWAPNMEVQNEYKVNIRMHTMVPDSLSWGKDPIANNPVRNTAEKQKVVTLGDK
CCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCEEEEECCE
ILLFAQNNEIYSTAIPAGSPTDRLNYGQKWDKETTGKLPDGADVTSIIRFVDKLYLLTKN
EEEEEECCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECC
KEVYNSNDGLTWTKDEVLNSDGVSVTNLITSFSDSDGSNHKKINGIAGIVEINGEKYFSF
CEEEECCCCCEEEHHHHCCCCCCCHHHHHHHCCCCCCCCCEEECCEEEEEEECCCEEEEE
AEKDVTWEKDIDKLTVVPAEFPINNLSADVYATESGTLNAIVVGNTEDGLDNDTATVVWA
CCCCCCHHCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEE
SEDGKAWIPMEIPSNNNCPKLVDPSIIHYNDAFYICGKETKDDAKGFQKFYTSPTLLVWK
CCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHCCCEEEEEC
GVDRMFMLPGILPPVKLEGGVTQHPSLHESSFKGKEVNYTMVVDRNHYIWMVGGQGIDKI
CCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCHHHH
WRGRVNKLGFLIQ
HHCCHHHCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA