Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349131

Identifier: 29349131

GI number: 29349131

Start: 4832670

End: 4833143

Strand: Reverse

Name: 29349131

Synonym: BT_3723

Alternate gene names: NA

Gene position: 4833143-4832670 (Counterclockwise)

Preceding gene: 29349132

Following gene: 29349130

Centisome position: 77.2

GC content: 41.77

Gene sequence:

>474_bases
ATGGGTGTATTTGCACAAAATCTGAAATTCGGTCATATTAATGCCCAAGAAATCGTTTCAGCAATGCCTGAATTTGCTAA
GGCACAATCTGATATTGAAGCACTAGACAAACAACTGACCAGCGAATTACAAAGAACTCAGGAAGAATTCAACAAGAAAT
ATCAGGAATTCCAGCAAGCTATCGCTAAGGACTCTCTTCCTGCTAACATCGCTGAAAGAAGACAAAAAGAACTGCAGGAT
ATGATGCAAAGACAAGAGCAGTTCCAACAGGAAGCTCAACAGCAGATGCAAAAAGCTCAGGCTGACGCAATGGCTCCTAT
CTACAAAAAGTTGGACGACGCAATTAAAGCTGTAGGTGCTGCCGAAGGCGTAATCTACATCTTCGACCTTGCAAGAACAC
CGGTTGCTTACGTTAATGAGTCACAAAGTATTAATCTGACTCCTAAGGTAAAGACACAGCTCGGCATCAAATAA

Upstream 100 bases:

>100_bases
TAATTTCATACATTTGCATCGAAAATAACTAAAAATCATTCAAATAAATTATAGAACTATGCTAAAAAAAATTGCACTTG
TATTGATGCTTGCACTCCCA

Downstream 100 bases:

>100_bases
GAAGCTATAAGCTATAAAATACCGAAAGGGAAAGAGAAAAGAAGATCATACATCTTTCTCTTTCCCTTTTTTCATGTAAC
TTTGCGTATATAAAACCGCA

Product: putative outer membrane protein OmpH

Products: NA

Alternate protein names: Outer Membrane Protein; OmpH/HlpA Family Protein; Outer Membrane Chaperone Skp; OmpH-Like Outer Membrane Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGVFAQNLKFGHINAQEIVSAMPEFAKAQSDIEALDKQLTSELQRTQEEFNKKYQEFQQAIAKDSLPANIAERRQKELQD
MMQRQEQFQQEAQQQMQKAQADAMAPIYKKLDDAIKAVGAAEGVIYIFDLARTPVAYVNESQSINLTPKVKTQLGIK

Sequences:

>Translated_157_residues
MGVFAQNLKFGHINAQEIVSAMPEFAKAQSDIEALDKQLTSELQRTQEEFNKKYQEFQQAIAKDSLPANIAERRQKELQD
MMQRQEQFQQEAQQQMQKAQADAMAPIYKKLDDAIKAVGAAEGVIYIFDLARTPVAYVNESQSINLTPKVKTQLGIK
>Mature_156_residues
GVFAQNLKFGHINAQEIVSAMPEFAKAQSDIEALDKQLTSELQRTQEEFNKKYQEFQQAIAKDSLPANIAERRQKELQDM
MQRQEQFQQEAQQQMQKAQADAMAPIYKKLDDAIKAVGAAEGVIYIFDLARTPVAYVNESQSINLTPKVKTQLGIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17793; Mature: 17662

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFAQNLKFGHINAQEIVSAMPEFAKAQSDIEALDKQLTSELQRTQEEFNKKYQEFQQA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAKDSLPANIAERRQKELQDMMQRQEQFQQEAQQQMQKAQADAMAPIYKKLDDAIKAVGA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGVIYIFDLARTPVAYVNESQSINLTPKVKTQLGIK
HCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
GVFAQNLKFGHINAQEIVSAMPEFAKAQSDIEALDKQLTSELQRTQEEFNKKYQEFQQA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAKDSLPANIAERRQKELQDMMQRQEQFQQEAQQQMQKAQADAMAPIYKKLDDAIKAVGA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGVIYIFDLARTPVAYVNESQSINLTPKVKTQLGIK
HCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA