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The map label for this gene is yohJ [C]

Identifier: 29349099

GI number: 29349099

Start: 4794719

End: 4795162

Strand: Reverse

Name: yohJ [C]

Synonym: BT_3691

Alternate gene names: 29349099

Gene position: 4795162-4794719 (Counterclockwise)

Preceding gene: 29349106

Following gene: 29349098

Centisome position: 76.6

GC content: 44.82

Gene sequence:

>444_bases
ATGATACGTCAGTGCGCCATTTTATTTGGCTGTTTGGCTTTGGGTGAATTAATCGTTTATTTAACAGGGATCAAGCTCCC
CTCCAGCATTATCGGTATGCTGCTGCTCACCCTTTTTTTGAAATTAGGCTGGATCAAACTGCAGTGGGTGCAGGGATTGT
CCGACTTTCTGGTAGCTAATCTGGGCTTCTTTTTCGTACCTCCCGGAGTAGCATTGATGTTGTACTTCGACGTTATTGCG
GCAGAATTCTGGCCTATCGTCATCGCAACAATCGTTAGCACGGCTCTCGTGCTGGTCGTAACGGGATGGGTACACCAGAT
TGTCCGTAAATTCAGAGTGGCACGTCAGATTAAACTGGCGAGTAGCCTACGCTTATCAGACTTTCACTTGTCCGACAAGC
TACATTTAAAAAACAAAACTAACTTAATGGATAAAGACAAATGA

Upstream 100 bases:

>100_bases
ATTTTATTCTCCAAGTCTAAAATATTATAATATTTAACACTGTACTTCTATTTTTTCTACCTTTGCAGTGTTTTCAAACA
AATCAATAGGTAATTAGTGT

Downstream 100 bases:

>100_bases
GCTTTTTAGAAAATAATTTCTTTCTGCTGGCTGTCACTTTCGGCGTTTTCTTCTTTGCCAAATTGCTTCAGAAGAAAACG
GGGCTGGTACTGCTGAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MIRQCAILFGCLALGELIVYLTGIKLPSSIIGMLLLTLFLKLGWIKLQWVQGLSDFLVANLGFFFVPPGVALMLYFDVIA
AEFWPIVIATIVSTALVLVVTGWVHQIVRKFRVARQIKLASSLRLSDFHLSDKLHLKNKTNLMDKDK

Sequences:

>Translated_147_residues
MIRQCAILFGCLALGELIVYLTGIKLPSSIIGMLLLTLFLKLGWIKLQWVQGLSDFLVANLGFFFVPPGVALMLYFDVIA
AEFWPIVIATIVSTALVLVVTGWVHQIVRKFRVARQIKLASSLRLSDFHLSDKLHLKNKTNLMDKDK
>Mature_147_residues
MIRQCAILFGCLALGELIVYLTGIKLPSSIIGMLLLTLFLKLGWIKLQWVQGLSDFLVANLGFFFVPPGVALMLYFDVIA
AEFWPIVIATIVSTALVLVVTGWVHQIVRKFRVARQIKLASSLRLSDFHLSDKLHLKNKTNLMDKDK

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=111, Percent_Identity=36.9369369369369, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 16528; Mature: 16528

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQCAILFGCLALGELIVYLTGIKLPSSIIGMLLLTLFLKLGWIKLQWVQGLSDFLVAN
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFFFVPPGVALMLYFDVIAAEFWPIVIATIVSTALVLVVTGWVHQIVRKFRVARQIKLA
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLRLSDFHLSDKLHLKNKTNLMDKDK
HHCCHHHHCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MIRQCAILFGCLALGELIVYLTGIKLPSSIIGMLLLTLFLKLGWIKLQWVQGLSDFLVAN
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFFFVPPGVALMLYFDVIAAEFWPIVIATIVSTALVLVVTGWVHQIVRKFRVARQIKLA
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLRLSDFHLSDKLHLKNKTNLMDKDK
HHCCHHHHCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA