| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349049
Identifier: 29349049
GI number: 29349049
Start: 4718080
End: 4719009
Strand: Reverse
Name: 29349049
Synonym: BT_3641
Alternate gene names: NA
Gene position: 4719009-4718080 (Counterclockwise)
Preceding gene: 29349050
Following gene: 29349045
Centisome position: 75.38
GC content: 46.77
Gene sequence:
>930_bases ATGTGGAAAGACTTTTTTTATTTTACTAAAACCGAACGACAAGGCATTATCGTCCTTGTCGTTCTTGTTATAGGGGTATA CACAATCCCCGCACTCTTGCAGGCTTTCTCCGGACCGGAGAAAACCGACCCGACTGAACAGGCGAAATCCGAAAAGGAAT ATAATGAATTTATCTCTTCCATAAAAGAAGCAAAGCAGGACAAGAAATATCCAGTTTACAGAGGCAGGTATTCATCGCCC GCCTATCCGAAAAAAGAAATCAGACCGGCAGCGTTCGATCCGAATACCGCCGACTCCGCCACTTTCCTCAGTCTCGGCTT GCCTACCTGGATGGCGGGCAATATTCTGCGATACCGCAGAAAGCAAGGCAGATTCCGACGTCCGGAAGACTTTCGGAAAA TATACGGGCTGACGGAAGAACAATACCGGACTCTTCAACCGTATATACGCATTGCCGAAACACCGGTCCTTCAAGATACC AGCCGGATATTAGTAGTACAAGCGACTGCACCATATGATACTTTAATGAAATACCCGCCGGGCACTATCATCGACCTTAA TCAGGCGGATACCACCGAACTTAAAAAGATTCCGGGGATCGGAAGCCGGATTGCCCGATCGATTGTAAACCATCGCCGGT TATTGGGAGGATTCTATCAGATAGAACAGTTAGGGGAGATTCGGTTAAAAGCGGAAAAGCTCCGTTCGTGGTTCTCCGTG GATGCTGGAAAGATTCACCGGATCAACATCAATAAGGCAAGTGTAGAGCGAATGATGCATCATCCGTACATCAGCTATTA TCAAGCCAAGGTCATTGCAGAGTACCGGAAGAAGAAGGGGAAAGTAAGAGACTTGAAACAACTGATGCTTTACGAGGAAT TCACACCCGCAGATTTCGAACGAATGGCGCCTTATGTTTGTTACGACTAA
Upstream 100 bases:
>100_bases AAGTTCCCGTATACAAACTGATCATCTTTATATTAAGATATATTGCACCGATTGCCATCTCTCTGATCTTTATCAATGAG TTGGGACTTATCAAACTATA
Downstream 100 bases:
>100_bases AATCGTATTTGTTGTGATATATAAAAAAAGATGCATTCCTATCACACCAGACAAGAATGCATCACACACAAACAAAACAA ACACTCTACTGACATCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MWKDFFYFTKTERQGIIVLVVLVIGVYTIPALLQAFSGPEKTDPTEQAKSEKEYNEFISSIKEAKQDKKYPVYRGRYSSP AYPKKEIRPAAFDPNTADSATFLSLGLPTWMAGNILRYRRKQGRFRRPEDFRKIYGLTEEQYRTLQPYIRIAETPVLQDT SRILVVQATAPYDTLMKYPPGTIIDLNQADTTELKKIPGIGSRIARSIVNHRRLLGGFYQIEQLGEIRLKAEKLRSWFSV DAGKIHRININKASVERMMHHPYISYYQAKVIAEYRKKKGKVRDLKQLMLYEEFTPADFERMAPYVCYD
Sequences:
>Translated_309_residues MWKDFFYFTKTERQGIIVLVVLVIGVYTIPALLQAFSGPEKTDPTEQAKSEKEYNEFISSIKEAKQDKKYPVYRGRYSSP AYPKKEIRPAAFDPNTADSATFLSLGLPTWMAGNILRYRRKQGRFRRPEDFRKIYGLTEEQYRTLQPYIRIAETPVLQDT SRILVVQATAPYDTLMKYPPGTIIDLNQADTTELKKIPGIGSRIARSIVNHRRLLGGFYQIEQLGEIRLKAEKLRSWFSV DAGKIHRININKASVERMMHHPYISYYQAKVIAEYRKKKGKVRDLKQLMLYEEFTPADFERMAPYVCYD >Mature_309_residues MWKDFFYFTKTERQGIIVLVVLVIGVYTIPALLQAFSGPEKTDPTEQAKSEKEYNEFISSIKEAKQDKKYPVYRGRYSSP AYPKKEIRPAAFDPNTADSATFLSLGLPTWMAGNILRYRRKQGRFRRPEDFRKIYGLTEEQYRTLQPYIRIAETPVLQDT SRILVVQATAPYDTLMKYPPGTIIDLNQADTTELKKIPGIGSRIARSIVNHRRLLGGFYQIEQLGEIRLKAEKLRSWFSV DAGKIHRININKASVERMMHHPYISYYQAKVIAEYRKKKGKVRDLKQLMLYEEFTPADFERMAPYVCYD
Specific function: Unknown
COG id: COG1555
COG function: function code L; DNA uptake protein and related DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36006; Mature: 36006
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKDFFYFTKTERQGIIVLVVLVIGVYTIPALLQAFSGPEKTDPTEQAKSEKEYNEFISS CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IKEAKQDKKYPVYRGRYSSPAYPKKEIRPAAFDPNTADSATFLSLGLPTWMAGNILRYRR HHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH KQGRFRRPEDFRKIYGLTEEQYRTLQPYIRIAETPVLQDTSRILVVQATAPYDTLMKYPP HCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCC GTIIDLNQADTTELKKIPGIGSRIARSIVNHRRLLGGFYQIEQLGEIRLKAEKLRSWFSV CCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DAGKIHRININKASVERMMHHPYISYYQAKVIAEYRKKKGKVRDLKQLMLYEEFTPADFE CCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHH RMAPYVCYD HCCCCCCCC >Mature Secondary Structure MWKDFFYFTKTERQGIIVLVVLVIGVYTIPALLQAFSGPEKTDPTEQAKSEKEYNEFISS CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IKEAKQDKKYPVYRGRYSSPAYPKKEIRPAAFDPNTADSATFLSLGLPTWMAGNILRYRR HHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH KQGRFRRPEDFRKIYGLTEEQYRTLQPYIRIAETPVLQDTSRILVVQATAPYDTLMKYPP HCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCC GTIIDLNQADTTELKKIPGIGSRIARSIVNHRRLLGGFYQIEQLGEIRLKAEKLRSWFSV CCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DAGKIHRININKASVERMMHHPYISYYQAKVIAEYRKKKGKVRDLKQLMLYEEFTPADFE CCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHH RMAPYVCYD HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA