| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349027
Identifier: 29349027
GI number: 29349027
Start: 4688463
End: 4689581
Strand: Reverse
Name: 29349027
Synonym: BT_3619
Alternate gene names: NA
Gene position: 4689581-4688463 (Counterclockwise)
Preceding gene: 29349028
Following gene: 29349026
Centisome position: 74.91
GC content: 43.07
Gene sequence:
>1119_bases ATGAATGTAACAACAAGTAACAAACGCCTATTGGCACTCGATGTGATGCGGGGCATCACCATCGCGGGTATGATCTTAGT AAATACGCCCGGTTCCTGGCAACATGCGTATGCTCCCCTCAAACATGCCGAGTGGATTGGATTAACTCCTACCGATCTGG TATTCCCATTCTTTATGTTCATTATGGGAATCTCCACGTACATCTCTTTGAGAAAGTACAATTTCACCTTCAGTGTTCCC GCGGGTTTAAAAATTCTCAAACGGACCGTGATCATTTTCCTGATTGGAATTGGCATCAGCTGGCTTTCCATTCTCTGCTT CCAGCACGATCCCTTCCCTATCGACCAGATTCGCATTCTCGGAGTCATGCAACGGCTTGCTTTGGGATATGGAGTTACTG CCATAGTCGCTTTACTCATGAAGCATAAATATATACCTTATTTAATTGCTGTACTTCTCATTAGTTATTTTGCAATCCTT GCCCTCGGCAATGGATATGTCTACGACGAAACAAATATTCTTTCCATCGTCGACCGTGCAGTATTAGGACAAGCTCATAT CTATGGCGGTCAGATACTTGATCCGGAAGGACTGCTTAGTACTATTTCAGCCATCGCCCACGTCTTAATCGGCTTCTGTG CCGGAAAGCTATTGATGGAAGTAAAAGATATTCATGAGAAGCTGGAACGTTTGTTCCTGATAGGTACTATCCTTACTTTC GCAGGTTTCTTACTGAGTTATGGTTCCCCTATCTGCAAGAAAGTATGGTCTCCTTCCTTCGTACTCGTAACCTGCGGTCT GGGTTCCAGTTTTCTGGCATTACTCGTATGGATCATTGACATTAAAGGTTATAAAAACTGGAGCCGTTTCTTCGAATCGT TTGGAGTAAATCCGCTATTTATTTATGTATTGGCAGATATTCTGGCGATTACGCTGGCAGTCATTCCTATGACCTACCAA GGTGAAGCGACTTCTTTACATGGCTATATTTACAGCGCACTCCTACAACCTGTCTTCGGAGATAAAGGAGGCTCGCTTGT ATTTGCCCTGCTTTTTGTCCTTCTCAACTGGGCAATAGGCTACATTCTATATAAAAAGAAAATATACATTAAGATATGA
Upstream 100 bases:
>100_bases CCTTGCTTCATGGATGATCCGCAATCGACTGGACAGTTCCTTCGGAAAAAAGAGATAAAATTGAATTACTTATAACTTAA CACATTAAAAAGTAACAGTC
Downstream 100 bases:
>100_bases TACTCATTGCAGACAGTGGTTCTACCAAAACAGACTGGTGTGTCGTACTGAACGGCGCAGTTATCAAGCGACTTGGAACG AAAGGGATCAACCCTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMFIMGISTYISLRKYNFTFSVP AGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRILGVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAIL ALGNGYVYDETNILSIVDRAVLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLFIYVLADILAITLAVIPMTYQ GEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIGYILYKKKIYIKI
Sequences:
>Translated_372_residues MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMFIMGISTYISLRKYNFTFSVP AGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRILGVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAIL ALGNGYVYDETNILSIVDRAVLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLFIYVLADILAITLAVIPMTYQ GEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIGYILYKKKIYIKI >Mature_372_residues MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMFIMGISTYISLRKYNFTFSVP AGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRILGVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAIL ALGNGYVYDETNILSIVDRAVLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLFIYVLADILAITLAVIPMTYQ GEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIGYILYKKKIYIKI
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=432, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24639786, Length=362, Percent_Identity=30.3867403314917, Blast_Score=115, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41366; Mature: 41366
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMF CCCCCCCCEEEHHHHHHCHHEEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH IMGISTYISLRKYNFTFSVPAGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRIL HHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAILALGNGYVYDETNILSIVDRA HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH VLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF HHCCHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLF HHHHHHCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH IYVLADILAITLAVIPMTYQGEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YILYKKKIYIKI HHHEEEEEEEEC >Mature Secondary Structure MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMF CCCCCCCCEEEHHHHHHCHHEEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH IMGISTYISLRKYNFTFSVPAGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRIL HHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAILALGNGYVYDETNILSIVDRA HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH VLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF HHCCHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLF HHHHHHCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH IYVLADILAITLAVIPMTYQGEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YILYKKKIYIKI HHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA