| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349005
Identifier: 29349005
GI number: 29349005
Start: 4657656
End: 4659080
Strand: Reverse
Name: 29349005
Synonym: BT_3597
Alternate gene names: NA
Gene position: 4659080-4657656 (Counterclockwise)
Preceding gene: 29349006
Following gene: 29349004
Centisome position: 74.42
GC content: 41.05
Gene sequence:
>1425_bases ATGAAGATTCTTATCTACTTTTTAATAATTGTACTGTGGAGCATCAATATGGAGGCAAAAGTCAAATTGCCTCCACTACT TAGTGACAATATGGTCTTACAGCAAAAAAGCAATGTACGAATCTGGGGAAAAGCGACTCCAAATTCTACTGTTGTAGTAA CTCCTTCATGGGCAAATAAGGAAGTCAAAACCCATGCTGACGAAAAGGGGTGTTGGGAATTACAGATCACAACGCCTGCT GCCAGTTTCGAAGAATATACATTAACACTGACGGATGGAGAACAATCTGTCACTTTGCAGCACCTCCTGATCGGAGAAGT CTGGTTATGTGCCGGACAATCAAATATGGTAATGCCTTTGAACGGATTTGATTATTGTCCCATAAGCGACTCCAATAATG TCATAGCAGATGCTCCCAATCATCCGGGAATACGAATGGTAACCATAAAGCCGACAGTAAAACTATCTCCGCAGGAGTAT GCAGAAGGAAGCTGGCAGCAACCAACTACGGAAAATGCTCCGAAGTTTAGTGCAGCCGCCTATCATTATGCATTAACTTT ACAACGGACCTTACAGATTCCTATAGGAGTTATCACCTGTGCATGGGGAGGCTCAAGAGTAGAAGGTTGGCTACCTAAAG AAATACTACAAACCTACAAAGATGAAGACCTGACTTTAATAGGAAGTGACAAGACACCAGTCTATTTACAATCGATGTTA ATGTATAATGGAATTTTATACCCCTGTCACAAATATACAATAAAAGGTTTTATCTGGTATCAAGGAGAAAGTAATGTAAG AAGTAGCAGAACATACGCCGAACGCCTAGCTACGATGGTAAAACATTGGCGATCAATATGGAAACAAGGAGACCTGCCTT TCTACTATGTTGAGACAGTCCCATTTGCCTGTGAATATAAAGAAGATGGCTACATAGGAGCATTATTGCGGGAAGCTCAA CAAAAGGCGCTTTCACTCATTCCCAATAGTGGTATGATCGGAACAAACGACTTAGTAGAGACATACGAAGCTCCTCAAGT GCATCCTCACAATAAAAAAGGGATTGGAGAACGCCTCGCATATATGTCCTTGAATAAGACATACGGATATCAGGGAATAG AATCCGAATATCCATCTTATAAAAGCATGAAAATCAACGGAGAGACAATTGAAATCTCCTTTTCCCATGCAGAAAAAGGA TTAAGCCCCTGGATGAATATCTCCGGATTTGAGATTGCAGGTTCAGATAAAGTCTTTTATCCGGCAGAGGCCTCTTTAAA TCAGAAGGATCATACAGTAATTGTCAAATCCCCAACAGTCAAATCTCCCGTTGCCGTTCGTTACTGTTTTCGGAATTTCC TGAAAGGAAATCTGATTAATACACGCAATCTGCCGGTCAGACCATTTCGCACAGATAAGTGGTAA
Upstream 100 bases:
>100_bases TTATCGTAATCCTCAGCACCATCCGGAACCGGCTGGTCCTGTCATCAAAAAGAAAGAAAAAATACAAATGGATTTCCGTG ACTAAAAAAAGAAATGCTAC
Downstream 100 bases:
>100_bases TAAAAACATAAAATAAATGATGAAAAGAATATATTATACATATCCGGTTTTATTAGTCTGGCTTGTGTCGACATTGTTGC CACAATTTTGTATAGCTATG
Product: sialic acid-specific 9-O-acetylesterase
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialate O-Acetylesterase Homolog; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKILIYFLIIVLWSINMEAKVKLPPLLSDNMVLQQKSNVRIWGKATPNSTVVVTPSWANKEVKTHADEKGCWELQITTPA ASFEEYTLTLTDGEQSVTLQHLLIGEVWLCAGQSNMVMPLNGFDYCPISDSNNVIADAPNHPGIRMVTIKPTVKLSPQEY AEGSWQQPTTENAPKFSAAAYHYALTLQRTLQIPIGVITCAWGGSRVEGWLPKEILQTYKDEDLTLIGSDKTPVYLQSML MYNGILYPCHKYTIKGFIWYQGESNVRSSRTYAERLATMVKHWRSIWKQGDLPFYYVETVPFACEYKEDGYIGALLREAQ QKALSLIPNSGMIGTNDLVETYEAPQVHPHNKKGIGERLAYMSLNKTYGYQGIESEYPSYKSMKINGETIEISFSHAEKG LSPWMNISGFEIAGSDKVFYPAEASLNQKDHTVIVKSPTVKSPVAVRYCFRNFLKGNLINTRNLPVRPFRTDKW
Sequences:
>Translated_474_residues MKILIYFLIIVLWSINMEAKVKLPPLLSDNMVLQQKSNVRIWGKATPNSTVVVTPSWANKEVKTHADEKGCWELQITTPA ASFEEYTLTLTDGEQSVTLQHLLIGEVWLCAGQSNMVMPLNGFDYCPISDSNNVIADAPNHPGIRMVTIKPTVKLSPQEY AEGSWQQPTTENAPKFSAAAYHYALTLQRTLQIPIGVITCAWGGSRVEGWLPKEILQTYKDEDLTLIGSDKTPVYLQSML MYNGILYPCHKYTIKGFIWYQGESNVRSSRTYAERLATMVKHWRSIWKQGDLPFYYVETVPFACEYKEDGYIGALLREAQ QKALSLIPNSGMIGTNDLVETYEAPQVHPHNKKGIGERLAYMSLNKTYGYQGIESEYPSYKSMKINGETIEISFSHAEKG LSPWMNISGFEIAGSDKVFYPAEASLNQKDHTVIVKSPTVKSPVAVRYCFRNFLKGNLINTRNLPVRPFRTDKW >Mature_474_residues MKILIYFLIIVLWSINMEAKVKLPPLLSDNMVLQQKSNVRIWGKATPNSTVVVTPSWANKEVKTHADEKGCWELQITTPA ASFEEYTLTLTDGEQSVTLQHLLIGEVWLCAGQSNMVMPLNGFDYCPISDSNNVIADAPNHPGIRMVTIKPTVKLSPQEY AEGSWQQPTTENAPKFSAAAYHYALTLQRTLQIPIGVITCAWGGSRVEGWLPKEILQTYKDEDLTLIGSDKTPVYLQSML MYNGILYPCHKYTIKGFIWYQGESNVRSSRTYAERLATMVKHWRSIWKQGDLPFYYVETVPFACEYKEDGYIGALLREAQ QKALSLIPNSGMIGTNDLVETYEAPQVHPHNKKGIGERLAYMSLNKTYGYQGIESEYPSYKSMKINGETIEISFSHAEKG LSPWMNISGFEIAGSDKVFYPAEASLNQKDHTVIVKSPTVKSPVAVRYCFRNFLKGNLINTRNLPVRPFRTDKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=387, Percent_Identity=26.3565891472868, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53596; Mature: 53596
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIYFLIIVLWSINMEAKVKLPPLLSDNMVLQQKSNVRIWGKATPNSTVVVTPSWANK CEEHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCCCC EVKTHADEKGCWELQITTPAASFEEYTLTLTDGEQSVTLQHLLIGEVWLCAGQSNMVMPL CHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEHHHHHHCEEEEEECCCCEEEEC NGFDYCPISDSNNVIADAPNHPGIRMVTIKPTVKLSPQEYAEGSWQQPTTENAPKFSAAA CCCCCCCCCCCCCEEEECCCCCCEEEEEECCCEEECHHHHCCCCCCCCCCCCCCCCCHHH YHYALTLQRTLQIPIGVITCAWGGSRVEGWLPKEILQTYKDEDLTLIGSDKTPVYLQSML EEEEEEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHH MYNGILYPCHKYTIKGFIWYQGESNVRSSRTYAERLATMVKHWRSIWKQGDLPFYYVETV HHCCEEEECEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PFACEYKEDGYIGALLREAQQKALSLIPNSGMIGTNDLVETYEAPQVHPHNKKGIGERLA CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHE YMSLNKTYGYQGIESEYPSYKSMKINGETIEISFSHAEKGLSPWMNISGFEIAGSDKVFY EEEECCCCCCCCCHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEE PAEASLNQKDHTVIVKSPTVKSPVAVRYCFRNFLKGNLINTRNLPVRPFRTDKW CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKILIYFLIIVLWSINMEAKVKLPPLLSDNMVLQQKSNVRIWGKATPNSTVVVTPSWANK CEEHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCCCC EVKTHADEKGCWELQITTPAASFEEYTLTLTDGEQSVTLQHLLIGEVWLCAGQSNMVMPL CHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEHHHHHHCEEEEEECCCCEEEEC NGFDYCPISDSNNVIADAPNHPGIRMVTIKPTVKLSPQEYAEGSWQQPTTENAPKFSAAA CCCCCCCCCCCCCEEEECCCCCCEEEEEECCCEEECHHHHCCCCCCCCCCCCCCCCCHHH YHYALTLQRTLQIPIGVITCAWGGSRVEGWLPKEILQTYKDEDLTLIGSDKTPVYLQSML EEEEEEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHH MYNGILYPCHKYTIKGFIWYQGESNVRSSRTYAERLATMVKHWRSIWKQGDLPFYYVETV HHCCEEEECEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PFACEYKEDGYIGALLREAQQKALSLIPNSGMIGTNDLVETYEAPQVHPHNKKGIGERLA CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHE YMSLNKTYGYQGIESEYPSYKSMKINGETIEISFSHAEKGLSPWMNISGFEIAGSDKVFY EEEECCCCCCCCCHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEE PAEASLNQKDHTVIVKSPTVKSPVAVRYCFRNFLKGNLINTRNLPVRPFRTDKW CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA