| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348999
Identifier: 29348999
GI number: 29348999
Start: 4647344
End: 4648525
Strand: Reverse
Name: 29348999
Synonym: BT_3591
Alternate gene names: NA
Gene position: 4648525-4647344 (Counterclockwise)
Preceding gene: 29349000
Following gene: 29348998
Centisome position: 74.25
GC content: 42.98
Gene sequence:
>1182_bases ATGAAACGTATTCTATTTATTCTCTTTCTCTGTTGTATAGGTAGTGGTCTTGCTGCTTGCCAAGACGAAGACCACACGGT CCCTACCCTCCCATCCGGGAATGATCCGGAAATAAACGATCCAGTCGTAGAATTCTATGATTGGGAAAAGAACCGCACCG AGTTACTGACATCTACAGATATGGTGTTACTTTATGGCGGAGGACATCATCGCACTCCCTATACATGGGATAAAGAACGT GTAAGTTCTTATATCAGATATGTAGATACCGACAATCAATCCCACTGGCTATTCGACAGCTTCCTCTTTTTGGAAATTAT GGACACAGGTACAGGAGGCGCTAATAAAATGTTCGCCAAAGGGTACAATCTGGAATCAGCCAATCAAGCAGACTGGACGA AACTTATAGACTATTACTTCCAATCTGAAACAGGAATCGGAGCATTAGATGCATCAGTCAAAGAGGCCTCTGCCATTTTG GGAACCCCACGGCAGAAACGTCAGATTGTGATCAGTATACCAGAGCCCATTGTCTACCAACACCCGGAACAAGCATCCTC ATCAACCAAGTATTGGGGGAAAATTGATAACCAGACGCTTGACTTTTCCAACTCTGCCGACCGAATTAAAGCCTGCAAAT GGTATATCGATCAGGTACGTGCCAAGTTCAATGAAAAGAACTATCAACATGTAGAATTAGCGGGATTTTATTGGCTTGCC GAGAAAGCGACCGACACCCGTGACATTTTAAATGCGGTTGCCATCTACCTGAATAAACTAAAATATAGTTTCAACTGGAT CCCCTATTATGGAGCAGATGGATATAATCAGTGGAAATCACTAGGATTTAATTATGCTTATTTCCAGCCTAATTATTTCT TCAACGAATCCGTCCCCGATTCTCGTCTGGAAGATGCCTGCCAGAAAGCACTCACGTATGATATGCACATGGAACTGGAA TTTGATGACAATGCTCTGAATAGCAGAGGAAAGGCTTATCGTTTGAAAAACTATATGAGTGCATTCAAGAAACATGGCAT ATGGGAGAAAAAACGCCTTGCCTATTATCAGGGAAGTGCATCCCTACTTACACTAAAAAAATCAGGGAACGCAGCCGATA CCCAACTCTATCATGAGTTCTGCAATTTTGTCATCAGCCGCCCCATCCGGAGTTCACATTAG
Upstream 100 bases:
>100_bases GACAAAAAAACTTAGGAATATTCAGTGGTAGTTATGAAACTTCCATCCCCTACCACGGTGTCTCCCTAATTAAAATAACA CCTATAAAATAAAAGCAAAT
Downstream 100 bases:
>100_bases TATAAACAGTTTAATCATCGCCATTCTATGAATCATAAATACCTATACTTACTCCTGCTATTTTTGATAGTCAGTTGCCA ACGCAATGTAGAAACAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKRILFILFLCCIGSGLAACQDEDHTVPTLPSGNDPEINDPVVEFYDWEKNRTELLTSTDMVLLYGGGHHRTPYTWDKER VSSYIRYVDTDNQSHWLFDSFLFLEIMDTGTGGANKMFAKGYNLESANQADWTKLIDYYFQSETGIGALDASVKEASAIL GTPRQKRQIVISIPEPIVYQHPEQASSSTKYWGKIDNQTLDFSNSADRIKACKWYIDQVRAKFNEKNYQHVELAGFYWLA EKATDTRDILNAVAIYLNKLKYSFNWIPYYGADGYNQWKSLGFNYAYFQPNYFFNESVPDSRLEDACQKALTYDMHMELE FDDNALNSRGKAYRLKNYMSAFKKHGIWEKKRLAYYQGSASLLTLKKSGNAADTQLYHEFCNFVISRPIRSSH
Sequences:
>Translated_393_residues MKRILFILFLCCIGSGLAACQDEDHTVPTLPSGNDPEINDPVVEFYDWEKNRTELLTSTDMVLLYGGGHHRTPYTWDKER VSSYIRYVDTDNQSHWLFDSFLFLEIMDTGTGGANKMFAKGYNLESANQADWTKLIDYYFQSETGIGALDASVKEASAIL GTPRQKRQIVISIPEPIVYQHPEQASSSTKYWGKIDNQTLDFSNSADRIKACKWYIDQVRAKFNEKNYQHVELAGFYWLA EKATDTRDILNAVAIYLNKLKYSFNWIPYYGADGYNQWKSLGFNYAYFQPNYFFNESVPDSRLEDACQKALTYDMHMELE FDDNALNSRGKAYRLKNYMSAFKKHGIWEKKRLAYYQGSASLLTLKKSGNAADTQLYHEFCNFVISRPIRSSH >Mature_393_residues MKRILFILFLCCIGSGLAACQDEDHTVPTLPSGNDPEINDPVVEFYDWEKNRTELLTSTDMVLLYGGGHHRTPYTWDKER VSSYIRYVDTDNQSHWLFDSFLFLEIMDTGTGGANKMFAKGYNLESANQADWTKLIDYYFQSETGIGALDASVKEASAIL GTPRQKRQIVISIPEPIVYQHPEQASSSTKYWGKIDNQTLDFSNSADRIKACKWYIDQVRAKFNEKNYQHVELAGFYWLA EKATDTRDILNAVAIYLNKLKYSFNWIPYYGADGYNQWKSLGFNYAYFQPNYFFNESVPDSRLEDACQKALTYDMHMELE FDDNALNSRGKAYRLKNYMSAFKKHGIWEKKRLAYYQGSASLLTLKKSGNAADTQLYHEFCNFVISRPIRSSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45400; Mature: 45400
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILFILFLCCIGSGLAACQDEDHTVPTLPSGNDPEINDPVVEFYDWEKNRTELLTSTD CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHEEECCC MVLLYGGGHHRTPYTWDKERVSSYIRYVDTDNQSHWLFDSFLFLEIMDTGTGGANKMFAK EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHEEEEEEEECCCCCCCCCEEC GYNLESANQADWTKLIDYYFQSETGIGALDASVKEASAILGTPRQKRQIVISIPEPIVYQ CCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCCCCCCEEEEECCCCCEEC HPEQASSSTKYWGKIDNQTLDFSNSADRIKACKWYIDQVRAKFNEKNYQHVELAGFYWLA CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE EKATDTRDILNAVAIYLNKLKYSFNWIPYYGADGYNQWKSLGFNYAYFQPNYFFNESVPD CCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCEEEEECCCCCCCCCCCH SRLEDACQKALTYDMHMELEFDDNALNSRGKAYRLKNYMSAFKKHGIWEKKRLAYYQGSA HHHHHHHHHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCC SLLTLKKSGNAADTQLYHEFCNFVISRPIRSSH EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKRILFILFLCCIGSGLAACQDEDHTVPTLPSGNDPEINDPVVEFYDWEKNRTELLTSTD CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHEEECCC MVLLYGGGHHRTPYTWDKERVSSYIRYVDTDNQSHWLFDSFLFLEIMDTGTGGANKMFAK EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHEEEEEEEECCCCCCCCCEEC GYNLESANQADWTKLIDYYFQSETGIGALDASVKEASAILGTPRQKRQIVISIPEPIVYQ CCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCCCCCCEEEEECCCCCEEC HPEQASSSTKYWGKIDNQTLDFSNSADRIKACKWYIDQVRAKFNEKNYQHVELAGFYWLA CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE EKATDTRDILNAVAIYLNKLKYSFNWIPYYGADGYNQWKSLGFNYAYFQPNYFFNESVPD CCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCEEEEECCCCCCCCCCCH SRLEDACQKALTYDMHMELEFDDNALNSRGKAYRLKNYMSAFKKHGIWEKKRLAYYQGSA HHHHHHHHHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCC SLLTLKKSGNAADTQLYHEFCNFVISRPIRSSH EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA