| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348998
Identifier: 29348998
GI number: 29348998
Start: 4645118
End: 4647316
Strand: Reverse
Name: 29348998
Synonym: BT_3590
Alternate gene names: NA
Gene position: 4647316-4645118 (Counterclockwise)
Preceding gene: 29348999
Following gene: 29348997
Centisome position: 74.23
GC content: 42.7
Gene sequence:
>2199_bases ATGAATCATAAATACCTATACTTACTCCTGCTATTTTTGATAGTCAGTTGCCAACGCAATGTAGAAACAGGCCCTCCTGT ATTAAAAGAAATGTGCCAAAGATTATTTCCCCGGCATGCCCAGTCGTTTCTATTCGAGTTACTGACAGATTCTATTGATA CAGACCGTTTTATACTGGAATCGAGTCAAGGGAAAATACGGATAAAAGGAAACAATCGTAACTCATTGGCTGCCGGTTTG AATCATTATCTGAAAAACTACTGTCATACCCATGTTTCCTGGTATGCCTCAGAGACAGTGGAAATGCCTGATGTACTACC GGAGATACCTCAGCCAGTATATATCCGTTCCAAATGTGACAATCGTTTTTTTCTCAACTATTGTACATTCGGTTATACTA TGCCCTATTGGAAATGGCAGGACTGGGAACGACTGATAGACTGGATGGCATTAAACGGAGTCACCATGCCTCTTGCTATT ACCGGACAAGAATCCATTTGGTACAAAGTATGGACAGACATGGGTTTGAGCGACGAACAGGTTCGCTCATACTTTACAGG GCCAGCCCATCTTCCCTGGCATCGGATGTCCAATGTCGATTTCTGGCAAAGTCCACTACCTCAATCCTGGCTAAAGGATC AGGAGGAATTACAAAAACGTATTCTCGAAAGAGAACGTGAGTTTGATATGACTCCTGTATTACCAGCATTTGCCGGTCAT GTACCAGCCGAATTAAAAACAATTTATCCGAATGCAAAAATCTATCAGATGAGTCAGTGGGGTGGCTTCGATGAAAAATA CCGCAGTCATTTTATTGATCCGATGGACTCATTATACTCAATCATTCAGCGCCGTTTTCTGGAGGAACAAACCAAAGTAT ATGGTACTGACCATATTTATGGAATCGATCCTTTCAATGAAGTCGACTCTCCTGACTGGAGCGAGGATTTTTTAGCCAAT GTTTCAAGCAAGATTTACGAGTCGATTCATCAGGTAGACTCAGCAGCCCAATGGTTACAAATGACCTGGATGTTCTTCTA TGACAAAAAGAAATGGACTCAACCCCGTATCCGTTCCTTTCTAAAAGCAGTACCGGATAACAAACTGATATTACTCGATT ACTATTGCGATCATACAGAAATCTGGCGAAATACTGAAAAATATTACGGGAATCCCTATATTTGGTGTTATCTGGGTAAT TTTGGCGGCAATACGATGATAGCAGGCAATCTGAATGATATTGATTTCAAGATTAAACGACTCTTCAAGGAGGGAGGAGA CAATGTCTATGGCTTGGGAGCAACTCTTGAAGGCTTTGATGTAAACCCTCTTATGTACGAATTTGTTTTTGACCAGGCAT GGGATTATCCTGTCACTACCGACCAATGGATAACCAACTGGTCCATGTGCAGAGGAGGAAATCAGGATGCCAATATCATC AAAGCGTGGAGAGCCTTGCATCAGAAAATTTATACCGAACATGCCACATGCGGCCAATCGGTATTAATGAACGCACGCCC CAGACTAACGGGAACTAAAAGTTGGAATACAAACCCCGGCATACATTACGCAAATAACGACTTATGGCAAATATGGAAAG AGCTACTAAAAGCCCGGAACATCAACAATAGTGATTTTCGCTTTGACGTAATCAATATCGGAAGACAAGTACTAGGAAAC TTGTTCTCCGAATATAGAGATCAGTTTACCGCTTGCTATAACCGGAAAGATACAACAGGCATGAGAGAATGGAGTACCCG TATGGACAACCTCTTGCTTGACGTAGACCGCCTCCTTTCCTGTGACGCGACTCTATCCATCGGGAAATGGTTACAAGACG CCAGAAACTGTGGTGCAACCGTGTCGGAAAAGGATTACTATGAAGAAAATGCACGCTGTATCCTGACCGTATGGGGGCAA CAGGACACCCAACTGAATGACTATGCCAATCGAGGCTGGGGCGGACTTACCCGAAGCTTCTACCGGGAACGTTGGAAACG TTTCACAGACGGAGTCATCGCTGCTGTTTCGGAAGATAAACCTTTTGACGAAGACAAATTCCACCAGGACATTACGCAAT TTGAATACAACTGGACATTACAGAAAGACTCTTTCCCTATTGTTTCAGAGGAAGACCCGATTCAAATAGCAGACAGTCTT ATCTTAAAATACGATACGTACTTTACCAAAGCACAATAA
Upstream 100 bases:
>100_bases CGCAGCCGATACCCAACTCTATCATGAGTTCTGCAATTTTGTCATCAGCCGCCCCATCCGGAGTTCACATTAGTATAAAC AGTTTAATCATCGCCATTCT
Downstream 100 bases:
>100_bases TGAAGGCGGACATTCGACAAACAGGCGCTTCAAAAGATACGTTTTTTGAATGTAGCTTTTCGTTTTTCACAGAGAAGAAA GAAATCGAATGTACTACCTT
Product: alpha-N-acetylglucosaminidase
Products: NA
Alternate protein names: Alpha-N-Acetylglucosaminidase Family Protein; N-Acetylglucosaminidase; Glycoside Hydrolase Family; Truncated N-Acetylglucosaminidase; LOW QUALITY PROTEIN Alpha-N-Acetylglucosaminidase
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MNHKYLYLLLLFLIVSCQRNVETGPPVLKEMCQRLFPRHAQSFLFELLTDSIDTDRFILESSQGKIRIKGNNRNSLAAGL NHYLKNYCHTHVSWYASETVEMPDVLPEIPQPVYIRSKCDNRFFLNYCTFGYTMPYWKWQDWERLIDWMALNGVTMPLAI TGQESIWYKVWTDMGLSDEQVRSYFTGPAHLPWHRMSNVDFWQSPLPQSWLKDQEELQKRILEREREFDMTPVLPAFAGH VPAELKTIYPNAKIYQMSQWGGFDEKYRSHFIDPMDSLYSIIQRRFLEEQTKVYGTDHIYGIDPFNEVDSPDWSEDFLAN VSSKIYESIHQVDSAAQWLQMTWMFFYDKKKWTQPRIRSFLKAVPDNKLILLDYYCDHTEIWRNTEKYYGNPYIWCYLGN FGGNTMIAGNLNDIDFKIKRLFKEGGDNVYGLGATLEGFDVNPLMYEFVFDQAWDYPVTTDQWITNWSMCRGGNQDANII KAWRALHQKIYTEHATCGQSVLMNARPRLTGTKSWNTNPGIHYANNDLWQIWKELLKARNINNSDFRFDVINIGRQVLGN LFSEYRDQFTACYNRKDTTGMREWSTRMDNLLLDVDRLLSCDATLSIGKWLQDARNCGATVSEKDYYEENARCILTVWGQ QDTQLNDYANRGWGGLTRSFYRERWKRFTDGVIAAVSEDKPFDEDKFHQDITQFEYNWTLQKDSFPIVSEEDPIQIADSL ILKYDTYFTKAQ
Sequences:
>Translated_732_residues MNHKYLYLLLLFLIVSCQRNVETGPPVLKEMCQRLFPRHAQSFLFELLTDSIDTDRFILESSQGKIRIKGNNRNSLAAGL NHYLKNYCHTHVSWYASETVEMPDVLPEIPQPVYIRSKCDNRFFLNYCTFGYTMPYWKWQDWERLIDWMALNGVTMPLAI TGQESIWYKVWTDMGLSDEQVRSYFTGPAHLPWHRMSNVDFWQSPLPQSWLKDQEELQKRILEREREFDMTPVLPAFAGH VPAELKTIYPNAKIYQMSQWGGFDEKYRSHFIDPMDSLYSIIQRRFLEEQTKVYGTDHIYGIDPFNEVDSPDWSEDFLAN VSSKIYESIHQVDSAAQWLQMTWMFFYDKKKWTQPRIRSFLKAVPDNKLILLDYYCDHTEIWRNTEKYYGNPYIWCYLGN FGGNTMIAGNLNDIDFKIKRLFKEGGDNVYGLGATLEGFDVNPLMYEFVFDQAWDYPVTTDQWITNWSMCRGGNQDANII KAWRALHQKIYTEHATCGQSVLMNARPRLTGTKSWNTNPGIHYANNDLWQIWKELLKARNINNSDFRFDVINIGRQVLGN LFSEYRDQFTACYNRKDTTGMREWSTRMDNLLLDVDRLLSCDATLSIGKWLQDARNCGATVSEKDYYEENARCILTVWGQ QDTQLNDYANRGWGGLTRSFYRERWKRFTDGVIAAVSEDKPFDEDKFHQDITQFEYNWTLQKDSFPIVSEEDPIQIADSL ILKYDTYFTKAQ >Mature_732_residues MNHKYLYLLLLFLIVSCQRNVETGPPVLKEMCQRLFPRHAQSFLFELLTDSIDTDRFILESSQGKIRIKGNNRNSLAAGL NHYLKNYCHTHVSWYASETVEMPDVLPEIPQPVYIRSKCDNRFFLNYCTFGYTMPYWKWQDWERLIDWMALNGVTMPLAI TGQESIWYKVWTDMGLSDEQVRSYFTGPAHLPWHRMSNVDFWQSPLPQSWLKDQEELQKRILEREREFDMTPVLPAFAGH VPAELKTIYPNAKIYQMSQWGGFDEKYRSHFIDPMDSLYSIIQRRFLEEQTKVYGTDHIYGIDPFNEVDSPDWSEDFLAN VSSKIYESIHQVDSAAQWLQMTWMFFYDKKKWTQPRIRSFLKAVPDNKLILLDYYCDHTEIWRNTEKYYGNPYIWCYLGN FGGNTMIAGNLNDIDFKIKRLFKEGGDNVYGLGATLEGFDVNPLMYEFVFDQAWDYPVTTDQWITNWSMCRGGNQDANII KAWRALHQKIYTEHATCGQSVLMNARPRLTGTKSWNTNPGIHYANNDLWQIWKELLKARNINNSDFRFDVINIGRQVLGN LFSEYRDQFTACYNRKDTTGMREWSTRMDNLLLDVDRLLSCDATLSIGKWLQDARNCGATVSEKDYYEENARCILTVWGQ QDTQLNDYANRGWGGLTRSFYRERWKRFTDGVIAAVSEDKPFDEDKFHQDITQFEYNWTLQKDSFPIVSEEDPIQIADSL ILKYDTYFTKAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI66346698, Length=669, Percent_Identity=34.678624813154, Blast_Score=452, Evalue=1e-127, Organism=Caenorhabditis elegans, GI32564213, Length=629, Percent_Identity=29.8887122416534, Blast_Score=292, Evalue=5e-79, Organism=Drosophila melanogaster, GI21356587, Length=656, Percent_Identity=31.0975609756098, Blast_Score=353, Evalue=2e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86340; Mature: 86340
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHKYLYLLLLFLIVSCQRNVETGPPVLKEMCQRLFPRHAQSFLFELLTDSIDTDRFILE CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SSQGKIRIKGNNRNSLAAGLNHYLKNYCHTHVSWYASETVEMPDVLPEIPQPVYIRSKCD CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCC NRFFLNYCTFGYTMPYWKWQDWERLIDWMALNGVTMPLAITGQESIWYKVWTDMGLSDEQ CEEEEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCHHH VRSYFTGPAHLPWHRMSNVDFWQSPLPQSWLKDQEELQKRILEREREFDMTPVLPAFAGH HHHHCCCCCCCCHHHCCCCCHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCC VPAELKTIYPNAKIYQMSQWGGFDEKYRSHFIDPMDSLYSIIQRRFLEEQTKVYGTDHIY CCCHHHEECCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE GIDPFNEVDSPDWSEDFLANVSSKIYESIHQVDSAAQWLQMTWMFFYDKKKWTQPRIRSF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LKAVPDNKLILLDYYCDHTEIWRNTEKYYGNPYIWCYLGNFGGNTMIAGNLNDIDFKIKR HHHCCCCCEEEEEEECCCHHHHCCHHHHCCCCEEEEEEECCCCCEEEECCCCCHHHHHHH LFKEGGDNVYGLGATLEGFDVNPLMYEFVFDQAWDYPVTTDQWITNWSMCRGGNQDANII HHHHCCCCEEEECCEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHCHHHHCCCCCCHHHH KAWRALHQKIYTEHATCGQSVLMNARPRLTGTKSWNTNPGIHYANNDLWQIWKELLKARN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCC INNSDFRFDVINIGRQVLGNLFSEYRDQFTACYNRKDTTGMREWSTRMDNLLLDVDRLLS CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC CDATLSIGKWLQDARNCGATVSEKDYYEENARCILTVWGQQDTQLNDYANRGWGGLTRSF CCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCHHHHHH YRERWKRFTDGVIAAVSEDKPFDEDKFHQDITQFEYNWTLQKDSFPIVSEEDPIQIADSL HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCHHHHHHH ILKYDTYFTKAQ HHHHHHHHCCCC >Mature Secondary Structure MNHKYLYLLLLFLIVSCQRNVETGPPVLKEMCQRLFPRHAQSFLFELLTDSIDTDRFILE CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SSQGKIRIKGNNRNSLAAGLNHYLKNYCHTHVSWYASETVEMPDVLPEIPQPVYIRSKCD CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCC NRFFLNYCTFGYTMPYWKWQDWERLIDWMALNGVTMPLAITGQESIWYKVWTDMGLSDEQ CEEEEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCHHH VRSYFTGPAHLPWHRMSNVDFWQSPLPQSWLKDQEELQKRILEREREFDMTPVLPAFAGH HHHHCCCCCCCCHHHCCCCCHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCC VPAELKTIYPNAKIYQMSQWGGFDEKYRSHFIDPMDSLYSIIQRRFLEEQTKVYGTDHIY CCCHHHEECCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE GIDPFNEVDSPDWSEDFLANVSSKIYESIHQVDSAAQWLQMTWMFFYDKKKWTQPRIRSF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LKAVPDNKLILLDYYCDHTEIWRNTEKYYGNPYIWCYLGNFGGNTMIAGNLNDIDFKIKR HHHCCCCCEEEEEEECCCHHHHCCHHHHCCCCEEEEEEECCCCCEEEECCCCCHHHHHHH LFKEGGDNVYGLGATLEGFDVNPLMYEFVFDQAWDYPVTTDQWITNWSMCRGGNQDANII HHHHCCCCEEEECCEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHCHHHHCCCCCCHHHH KAWRALHQKIYTEHATCGQSVLMNARPRLTGTKSWNTNPGIHYANNDLWQIWKELLKARN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCC INNSDFRFDVINIGRQVLGNLFSEYRDQFTACYNRKDTTGMREWSTRMDNLLLDVDRLLS CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC CDATLSIGKWLQDARNCGATVSEKDYYEENARCILTVWGQQDTQLNDYANRGWGGLTRSF CCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCHHHHHH YRERWKRFTDGVIAAVSEDKPFDEDKFHQDITQFEYNWTLQKDSFPIVSEEDPIQIADSL HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCHHHHHHH ILKYDTYFTKAQ HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA