Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348987

Identifier: 29348987

GI number: 29348987

Start: 4631000

End: 4631860

Strand: Reverse

Name: 29348987

Synonym: BT_3578

Alternate gene names: NA

Gene position: 4631860-4631000 (Counterclockwise)

Preceding gene: 29348988

Following gene: 29348986

Centisome position: 73.99

GC content: 47.97

Gene sequence:

>861_bases
ATGAAGAAAAACTTATTATACTTAGGGCTGACAGGATACCTCCTGTTCGCCCTCTGCACAAGATTACAGGCGCAGACCGA
CAGTCTGCAAGCACATCGCTACGTAACACGTGCCACCATGTACGGAGTCGGATTTACCAATGTGTTCGACACCTATCTTT
CGCCTCAGGAATATAAAGGAATAGATTTCCGTATTTCCCGCGAGACGATCCGGATGACAAAGTTGTTCGACGGGAATGTT
TCTGTGCAGAACTTCTTTCAGGCAGACGTCGGCTATACACACAACCGCGCAGACAACAACAATACCTTCTCCGGACTCGT
CAACTGGAACTATGGCCTCCATTACCAGTTCCGCCTCACCGAGAACTTCAAGTTACTGGCAGGAGGACTGTTTGACGTCA
ACGGAGGATTTGTCTACAATCTCCGCAATTCGAACAATCCGGCTTCTGCCCGGGCATACGTCAATCTGGACGCTTCGGGA
ATGGCTATCTGGCATTTGAAAATCAAGCGCTATCCGATGGTACTCCGCTATCAAGTCAACGTGCCGATGATCGGACTTAT
GTTCTCACCGCACTACGGACAGTCTTATTACGAAATCTTCTCACTGGGCAACTCCAGCGGAGTTATCCAATTTACCTCTC
TCCACAATCAACCGTCTCTCCGTCAGATGCTTTCTGTCGATCTGCCGATAGGATATACCAAGATGCGTTTCAGTTATCTG
GCAGACTTGCAACAATCCAATGTTAACGGAATCAAGACACATACCTACTCTCATGTATTTATGGTAGGATTTGTGAAAGA
CCTGTATCGGGTTTCCAACAAAAAAGGAGCGAATCTGCCTCCGTCGGTGAGGGCGTACTAG

Upstream 100 bases:

>100_bases
ACAGCGATAAGAGCGAAGGGGACATCATCGATGAGATTACGGGACAGATGAAGCTGTTTTAGCTAATGTATACATGCGGT
AAAAAATACCCAATGTGCCA

Downstream 100 bases:

>100_bases
GAGAAGTGGAGAGTGGAGAATTTATGGACAAGAACTGAAAGATTAAGAATGAGAAATAGAATTATACAACTACTTTTACT
GCTCTGCTGCCTCCCGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKNLLYLGLTGYLLFALCTRLQAQTDSLQAHRYVTRATMYGVGFTNVFDTYLSPQEYKGIDFRISRETIRMTKLFDGNV
SVQNFFQADVGYTHNRADNNNTFSGLVNWNYGLHYQFRLTENFKLLAGGLFDVNGGFVYNLRNSNNPASARAYVNLDASG
MAIWHLKIKRYPMVLRYQVNVPMIGLMFSPHYGQSYYEIFSLGNSSGVIQFTSLHNQPSLRQMLSVDLPIGYTKMRFSYL
ADLQQSNVNGIKTHTYSHVFMVGFVKDLYRVSNKKGANLPPSVRAY

Sequences:

>Translated_286_residues
MKKNLLYLGLTGYLLFALCTRLQAQTDSLQAHRYVTRATMYGVGFTNVFDTYLSPQEYKGIDFRISRETIRMTKLFDGNV
SVQNFFQADVGYTHNRADNNNTFSGLVNWNYGLHYQFRLTENFKLLAGGLFDVNGGFVYNLRNSNNPASARAYVNLDASG
MAIWHLKIKRYPMVLRYQVNVPMIGLMFSPHYGQSYYEIFSLGNSSGVIQFTSLHNQPSLRQMLSVDLPIGYTKMRFSYL
ADLQQSNVNGIKTHTYSHVFMVGFVKDLYRVSNKKGANLPPSVRAY
>Mature_286_residues
MKKNLLYLGLTGYLLFALCTRLQAQTDSLQAHRYVTRATMYGVGFTNVFDTYLSPQEYKGIDFRISRETIRMTKLFDGNV
SVQNFFQADVGYTHNRADNNNTFSGLVNWNYGLHYQFRLTENFKLLAGGLFDVNGGFVYNLRNSNNPASARAYVNLDASG
MAIWHLKIKRYPMVLRYQVNVPMIGLMFSPHYGQSYYEIFSLGNSSGVIQFTSLHNQPSLRQMLSVDLPIGYTKMRFSYL
ADLQQSNVNGIKTHTYSHVFMVGFVKDLYRVSNKKGANLPPSVRAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32694; Mature: 32694

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLLYLGLTGYLLFALCTRLQAQTDSLQAHRYVTRATMYGVGFTNVFDTYLSPQEYKG
CCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCHHHHHHHHCCCHHCCC
IDFRISRETIRMTKLFDGNVSVQNFFQADVGYTHNRADNNNTFSGLVNWNYGLHYQFRLT
CEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEC
ENFKLLAGGLFDVNGGFVYNLRNSNNPASARAYVNLDASGMAIWHLKIKRYPMVLRYQVN
CCEEEEECCEEECCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEEEC
VPMIGLMFSPHYGQSYYEIFSLGNSSGVIQFTSLHNQPSLRQMLSVDLPIGYTKMRFSYL
CCEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHEECCCCCHHHHHHHHH
ADLQQSNVNGIKTHTYSHVFMVGFVKDLYRVSNKKGANLPPSVRAY
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKNLLYLGLTGYLLFALCTRLQAQTDSLQAHRYVTRATMYGVGFTNVFDTYLSPQEYKG
CCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCHHHHHHHHCCCHHCCC
IDFRISRETIRMTKLFDGNVSVQNFFQADVGYTHNRADNNNTFSGLVNWNYGLHYQFRLT
CEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEC
ENFKLLAGGLFDVNGGFVYNLRNSNNPASARAYVNLDASGMAIWHLKIKRYPMVLRYQVN
CCEEEEECCEEECCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEEEC
VPMIGLMFSPHYGQSYYEIFSLGNSSGVIQFTSLHNQPSLRQMLSVDLPIGYTKMRFSYL
CCEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHEECCCCCHHHHHHHHH
ADLQQSNVNGIKTHTYSHVFMVGFVKDLYRVSNKKGANLPPSVRAY
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA